Difference between revisions of "IDS1"

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(Created page with "Category:reaction == Reaction NADH-KINASE-RXN == * direction: ** left-to-right * common-name: ** nadh kinase * ec-number: ** [http://enzyme.expasy.org/EC/2.7.1.86 ec-2.7.1...")
(Created page with "Category:reaction == Reaction IDS1 == * direction: ** left-to-right * common-name: ** isopentenyl-diphosphate synthase == Reaction formula == * 1.0 HYDROXY-METHYL-BUTENY...")
 
(6 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction NADH-KINASE-RXN ==
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== Reaction IDS1 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** nadh kinase
+
** isopentenyl-diphosphate synthase
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/2.7.1.86 ec-2.7.1.86]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[NADH]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c]
+
* 1.0 [[HYDROXY-METHYL-BUTENYL-DIP]][h] '''+''' 1.0 [[NADPH]][h] '''+''' 1.0 [[PROTON]][h] '''=>''' 1.0 [[DELTA3-ISOPENTENYL-PP]][h] '''+''' 1.0 [[NADP]][h] '''+''' 1.0 [[WATER]][h]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ17319]]
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* Gene: [[SJ04795]]
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** Category: [[annotation]]
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** Category: [[orthology]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ16336]]
 
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** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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* [[PWY-7269]], NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast):
 
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** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-7268]], NAD/NADP-NADH/NADPH cytosolic interconversion (yeast):
 
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** '''4''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-5083]], NAD/NADH phosphorylation and dephosphorylation:
 
−
** '''5''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12261 12261]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00105 R00105]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=nadh kinase}}
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{{#set: common-name=isopentenyl-diphosphate synthase}}
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{{#set: ec-number=ec-2.7.1.86}}
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{{#set: nb gene associated=1}}
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{{#set: nb gene associated=2}}
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{{#set: nb pathway associated=0}}
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{{#set: nb pathway associated=3}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction tool=pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}

Latest revision as of 11:23, 18 March 2021

Reaction IDS1

  • direction:
    • left-to-right
  • common-name:
    • isopentenyl-diphosphate synthase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=IDS1&oldid=142409"