Difference between revisions of "IGPD"
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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17131 RXN-17131] == * direction: ** left-to-right * common-name: ** nπ-phospho-l-histidine p...") |
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-221 RXN66-221] == * direction: ** left-to-right * common-name: ** dopa decarboxylase * ec-num...") |
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| Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-221 RXN66-221] == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
* common-name: | * common-name: | ||
| − | ** | + | ** dopa decarboxylase |
* ec-number: | * ec-number: | ||
| − | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/4.1.1.28 ec-4.1.1.28] |
== Reaction formula == | == Reaction formula == | ||
| − | * 1 [[ | + | * 1 [[L-DIHYDROXY-PHENYLALANINE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[DOPAMINE]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | * Gene: [[ | + | * Gene: [[SJ11952]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
| + | * [[PWY66-301]], catecholamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-301 PWY66-301] | ||
| + | ** '''2''' reactions found over '''4''' reactions in the full pathway | ||
| + | * [[PWY-5426]], betaxanthin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5426 PWY-5426] | ||
| + | ** '''1''' reactions found over '''3''' reactions in the full pathway | ||
| + | * [[PWY-5403]], betaxanthin biosynthesis (via dopamine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5403 PWY-5403] | ||
| + | ** '''1''' reactions found over '''2''' reactions in the full pathway | ||
| + | * [[PWY-3581]], (S)-reticuline biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3581 PWY-3581] | ||
| + | ** '''6''' reactions found over '''11''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12273 12273] |
| + | * LIGAND-RXN: | ||
| + | ** [http://www.genome.jp/dbget-bin/www_bget?R02080 R02080] | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
| − | {{#set: common-name= | + | {{#set: common-name=dopa decarboxylase}} |
| − | {{#set: ec-number=ec- | + | {{#set: ec-number=ec-4.1.1.28}} |
{{#set: nb gene associated=1}} | {{#set: nb gene associated=1}} | ||
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=4}} |
{{#set: reconstruction category=annotation}} | {{#set: reconstruction category=annotation}} | ||
{{#set: reconstruction tool=pathwaytools}} | {{#set: reconstruction tool=pathwaytools}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
{{#set: reconstruction source=saccharina_japonica_genome}} | {{#set: reconstruction source=saccharina_japonica_genome}} | ||
Revision as of 09:31, 27 August 2019
Contents
Reaction RXN66-221
- direction:
- left-to-right
- common-name:
- dopa decarboxylase
- ec-number:
Reaction formula
- 1 L-DIHYDROXY-PHENYLALANINE[c] + 1 PROTON[c] => 1 CARBON-DIOXIDE[c] + 1 DOPAMINE[c]
Gene(s) associated with this reaction
- Gene: SJ11952
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
Pathway(s)
- PWY66-301, catecholamine biosynthesis: PWY66-301
- 2 reactions found over 4 reactions in the full pathway
- PWY-5426, betaxanthin biosynthesis: PWY-5426
- 1 reactions found over 3 reactions in the full pathway
- PWY-5403, betaxanthin biosynthesis (via dopamine): PWY-5403
- 1 reactions found over 2 reactions in the full pathway
- PWY-3581, (S)-reticuline biosynthesis I: PWY-3581
- 6 reactions found over 11 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links
