Difference between revisions of "IGPSYN-RXN"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction RXN-11480 == * direction: ** left-to-right * common-name: ** 3-oxo-pimeloyl-[acp] methyl ester reductase ** 3-oxoacyl-[acyl-carrier-protein]...")
(Created page with "Category:reaction == Reaction 3.2.1.91-RXN == * direction: ** left-to-right * common-name: ** cellulose 1,4-beta-cellobiosidase * ec-number: ** [http://enzyme.expasy.org/E...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-11480 ==
+
== Reaction 3.2.1.91-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** 3-oxo-pimeloyl-[acp] methyl ester reductase
+
** cellulose 1,4-beta-cellobiosidase
−
** 3-oxoacyl-[acyl-carrier-protein] reductase (nadph)
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.1.1.100 ec-1.1.1.100]
+
** [http://enzyme.expasy.org/EC/3.2.1.91 ec-3.2.1.91]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[3-Ketopimeloyl-ACP-methyl-esters]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[3-hydroxypimeloyl-ACP-methyl-esters]][c] '''+''' 1 [[NADP]][c]
+
* 1 [[Cellodextrins]][c] '''+''' n [[WATER]][c] '''=>''' n+1 [[CELLOBIOSE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ17743]]
+
* Gene: [[SJ06513]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[SJ04229]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ13014]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6519]], 8-amino-7-oxononanoate biosynthesis I:
+
* [[PWY-6788]], cellulose degradation II (fungi):
−
** '''9''' reactions found over '''11''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P07986 P07986]
 +
** [http://www.uniprot.org/uniprot/P07987 P07987]
 +
** [http://www.uniprot.org/uniprot/Q6UJX9 Q6UJX9]
 +
** [http://www.uniprot.org/uniprot/Q60029 Q60029]
 +
** [http://www.uniprot.org/uniprot/Q01763 Q01763]
 +
** [http://www.uniprot.org/uniprot/P62694 P62694]
 +
** [http://www.uniprot.org/uniprot/P13860 P13860]
 +
** [http://www.uniprot.org/uniprot/Q06886 Q06886]
 +
** [http://www.uniprot.org/uniprot/P10474 P10474]
 +
** [http://www.uniprot.org/uniprot/P19355 P19355]
 +
** [http://www.uniprot.org/uniprot/Q01599 Q01599]
 +
** [http://www.uniprot.org/uniprot/Q01600 Q01600]
 +
** [http://www.uniprot.org/uniprot/P15828 P15828]
 +
** [http://www.uniprot.org/uniprot/P38535 P38535]
 +
** [http://www.uniprot.org/uniprot/Q09431 Q09431]
 +
** [http://www.uniprot.org/uniprot/P38676 P38676]
 +
** [http://www.uniprot.org/uniprot/Q59325 Q59325]
 +
** [http://www.uniprot.org/uniprot/P50899 P50899]
 +
** [http://www.uniprot.org/uniprot/P49075 P49075]
 +
** [http://www.uniprot.org/uniprot/Q9XCD4 Q9XCD4]
 +
</div>
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=3-oxoacyl-[acyl-carrier-protein] reductase (nadph)|3-oxo-pimeloyl-[acp] methyl ester reductase}}
+
{{#set: common-name=cellulose 1,4-beta-cellobiosidase}}
−
{{#set: ec-number=ec-1.1.1.100}}
+
{{#set: ec-number=ec-3.2.1.91}}
−
{{#set: nb gene associated=3}}
+
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 19:05, 14 January 2021

Reaction 3.2.1.91-RXN

  • direction:
    • left-to-right
  • common-name:
    • cellulose 1,4-beta-cellobiosidase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6788, cellulose degradation II (fungi):
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=IGPSYN-RXN&oldid=103556"