Difference between revisions of "IMIDPHOSDEHYD-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=UDP-N-ACETYLGLUCOSAMINE-4-EPIMERASE-RXN UDP-N-ACETYLGLUCOSAMINE-4-EPIMERASE-RXN] == * direction: **...")
(Created page with "Category:reaction == Reaction IMIDPHOSDEHYD-RXN == * direction: ** left-to-right * common-name: ** imidazoleglycerol-phosphate dehydratase * ec-number: ** [http://enzyme.e...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=UDP-N-ACETYLGLUCOSAMINE-4-EPIMERASE-RXN UDP-N-ACETYLGLUCOSAMINE-4-EPIMERASE-RXN] ==
+
== Reaction IMIDPHOSDEHYD-RXN ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** udp-n-acetylglucosamine 4-epimerase
+
** imidazoleglycerol-phosphate dehydratase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/5.1.3.7 ec-5.1.3.7]
+
** [http://enzyme.expasy.org/EC/4.2.1.19 ec-4.2.1.19]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[UDP-N-ACETYL-D-GLUCOSAMINE]][c] '''<=>''' 1 [[CPD-14795]][c]
+
* 1 [[D-ERYTHRO-IMIDAZOLE-GLYCEROL-P]][c] '''=>''' 1 [[IMIDAZOLE-ACETOL-P]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ16452]]
+
* Gene: [[SJ17441]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5512]], UDP-N-acetyl-D-galactosamine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5512 PWY-5512]
+
* [[HISTSYN-PWY]], L-histidine biosynthesis:
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''10''' reactions found over '''10''' reactions in the full pathway
−
* [[PWY-7820]], teichuronic acid biosynthesis (B. subtilis 168): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7820 PWY-7820]
 
−
** '''2''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-5514]], UDP-N-acetyl-D-galactosamine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5514 PWY-5514]
 
−
** '''5''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* METANETX-RXN : MNXR100813
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20520 20520]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11041 11041]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00418 R00418]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03457 R03457]
−
{{#set: direction=reversible}}
+
* UNIPROT:
−
{{#set: common-name=udp-n-acetylglucosamine 4-epimerase}}
+
** [http://www.uniprot.org/uniprot/Q58109 Q58109]
−
{{#set: ec-number=ec-5.1.3.7}}
+
** [http://www.uniprot.org/uniprot/P06633 P06633]
 +
** [http://www.uniprot.org/uniprot/P10368 P10368]
 +
** [http://www.uniprot.org/uniprot/P06987 P06987]
 +
** [http://www.uniprot.org/uniprot/Q9PM76 Q9PM76]
 +
** [http://www.uniprot.org/uniprot/P44327 P44327]
 +
** [http://www.uniprot.org/uniprot/Q02134 Q02134]
 +
** [http://www.uniprot.org/uniprot/P64371 P64371]
 +
** [http://www.uniprot.org/uniprot/Q12578 Q12578]
 +
** [http://www.uniprot.org/uniprot/P18787 P18787]
 +
** [http://www.uniprot.org/uniprot/P16247 P16247]
 +
** [http://www.uniprot.org/uniprot/P28624 P28624]
 +
** [http://www.uniprot.org/uniprot/P34041 P34041]
 +
** [http://www.uniprot.org/uniprot/Q02986 Q02986]
 +
** [http://www.uniprot.org/uniprot/P40374 P40374]
 +
** [http://www.uniprot.org/uniprot/P48054 P48054]
 +
** [http://www.uniprot.org/uniprot/Q43072 Q43072]
 +
** [http://www.uniprot.org/uniprot/Q9X7B9 Q9X7B9]
 +
** [http://www.uniprot.org/uniprot/O48932 O48932]
 +
</div>
 +
{{#set: direction=left-to-right}}
 +
{{#set: common-name=imidazoleglycerol-phosphate dehydratase}}
 +
{{#set: ec-number=ec-4.2.1.19}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome}}

Latest revision as of 11:19, 18 March 2021

Reaction IMIDPHOSDEHYD-RXN

  • direction:
    • left-to-right
  • common-name:
    • imidazoleglycerol-phosphate dehydratase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • HISTSYN-PWY, L-histidine biosynthesis:
    • 10 reactions found over 10 reactions in the full pathway

Reconstruction information

External links





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