Difference between revisions of "INDOLE-23-DIOXYGENASE-RXN"

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(Created page with "Category:reaction == Reaction RXN-10039 == * direction: ** left-to-right * common-name: ** selenocysteine synthase * ec-number: ** [http://enzyme.expasy.org/EC/2.9.1.2 ec-...")
(Created page with "Category:reaction == Reaction INDOLE-23-DIOXYGENASE-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.13.11.17 ec-1.13.11.17] == Reaction...")
 
(One intermediate revision by one other user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-10039 ==
+
== Reaction INDOLE-23-DIOXYGENASE-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
* common-name:
 
** selenocysteine synthase
 
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/2.9.1.2 ec-2.9.1.2]
+
** [http://enzyme.expasy.org/EC/1.13.11.17 ec-1.13.11.17]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[O-phospho-L-seryl-tRNASecs]][c] '''+''' 1 [[SEPO3]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Charged-SEC-tRNAs]][c] '''+''' 2 [[Pi]][c]
+
* 1 [[INDOLE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CPD-248]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ07198]]
+
* Gene: [[SJ12575]]
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-6281]], L-selenocysteine biosynthesis II (archaea and eukaryotes):
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* [[PWY-7430]], indole degradation to anthranil and anthranilate:
** '''4''' reactions found over '''4''' reactions in the full pathway
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** '''1''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR107449
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25042 25042]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11212 11212]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
** [http://www.genome.jp/dbget-bin/www_bget?R08224 R08224]
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** [http://www.genome.jp/dbget-bin/www_bget?R02338 R02338]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=selenocysteine synthase}}
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{{#set: ec-number=ec-1.13.11.17}}
{{#set: ec-number=ec-2.9.1.2}}
 
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology}}
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}

Latest revision as of 11:23, 18 March 2021

Reaction INDOLE-23-DIOXYGENASE-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7430, indole degradation to anthranil and anthranilate:
    • 1 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR107449
  • RHEA:
  • LIGAND-RXN: