Difference between revisions of "IPPISOM-RXN"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6520 PWY-6520] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-33090 tax-3...")
(Created page with "Category:reaction == Reaction RXN-16138 == * direction: ** left-to-right * common-name: ** phospholipase a2 * ec-number: ** [http://enzyme.expasy.org/EC/3.1.1.4 ec-3.1.1.4...")
Line 1: Line 1:
−
[[Category:pathway]]
+
[[Category:reaction]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6520 PWY-6520] ==
+
== Reaction RXN-16138 ==
−
* taxonomic-range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=tax-33090 tax-33090]
+
** left-to-right
 
* common-name:
 
* common-name:
−
** nonaprenyl diphosphate biosynthesis ii
+
** phospholipase a2
−
== Reaction(s) found ==
+
* ec-number:
−
* [[RXN-11486]]
+
** [http://enzyme.expasy.org/EC/3.1.1.4 ec-3.1.1.4]
−
== Reaction(s) not found ==
+
== Reaction formula ==
−
All reactions of this pathways are in present
+
* 1 [[CPD-17355]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-10244]][c] '''+''' 1 [[Glycerolipids]][c] '''+''' 1 [[PROTON]][c]
−
{{#set: taxonomic-range=tax-33090}}
+
== Gene(s) associated with this reaction  ==
−
{{#set: common-name=nonaprenyl diphosphate biosynthesis ii}}
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
{{#set: nb reaction found=1}}
+
* Gene: [[SJ12662]]
−
{{#set: completion rate=1.0}}
+
** Category: [[annotation]]
−
{{#set: nb total reaction=1}}
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ06461]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ13501]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ04543]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ16853]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ09888]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ02841]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ18009]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
</div>
 +
== Pathway(s) ==
 +
* [[PWY66-397]], resolvin D biosynthesis:
 +
** '''1''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY66-395]], aspirin triggered resolvin D biosynthesis:
 +
** '''1''' reactions found over '''10''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
== External links  ==
 +
{{#set: direction=left-to-right}}
 +
{{#set: common-name=phospholipase a2}}
 +
{{#set: ec-number=ec-3.1.1.4}}
 +
{{#set: nb gene associated=8}}
 +
{{#set: nb pathway associated=2}}
 +
{{#set: reconstruction category=annotation|orthology}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}
 +
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 20:46, 18 December 2020

Reaction RXN-16138

  • direction:
    • left-to-right
  • common-name:
    • phospholipase a2
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY66-397, resolvin D biosynthesis:
    • 1 reactions found over 11 reactions in the full pathway
  • PWY66-395, aspirin triggered resolvin D biosynthesis:
    • 1 reactions found over 10 reactions in the full pathway

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=IPPISOM-RXN&oldid=51556"