Difference between revisions of "ISOCHORSYN-RXN"

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(Created page with "Category:reaction == Reaction RXN-17877 == * direction: ** left-to-right * common-name: ** methionine aminopeptidase * ec-number: ** [http://enzyme.expasy.org/EC/3.4.11.18...")
(Created page with "Category:reaction == Reaction MCDH_LPAREN_2mb2coa_RPAREN_ == * direction: ** left-to-right * common-name: ** 2-methylacyl-coa dehydrogenase, trans-2-methylbut-2-enoyl-coa...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-17877 ==
+
== Reaction MCDH_LPAREN_2mb2coa_RPAREN_ ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** methionine aminopeptidase
+
** 2-methylacyl-coa dehydrogenase, trans-2-methylbut-2-enoyl-coa forming
* ec-number:
 
** [http://enzyme.expasy.org/EC/3.4.11.18 ec-3.4.11.18]
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[L-methionyl-L-threonyl-Protein]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[MET]][c] '''+''' 1 [[Protein-N-terminal-L-threonine]][c]
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* 1.0 [[2-METHYL-BUTYRYL-COA]][m] '''+''' 1.0 [[FAD]][m] '''=>''' 1.0 [[CPD-1083]][m] '''+''' 1.0 [[FADH2]][m]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ02903]]
+
* Gene: [[SJ07241]]
** Category: [[annotation]]
+
** Category: [[orthology]]
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
* Gene: [[SJ16573]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ16932]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ18138]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ16939]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ01604]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-7800]], Ac/N-end rule pathway:
 
** '''6''' reactions found over '''21''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=methionine aminopeptidase}}
+
{{#set: common-name=2-methylacyl-coa dehydrogenase, trans-2-methylbut-2-enoyl-coa forming}}
{{#set: ec-number=ec-3.4.11.18}}
+
{{#set: nb gene associated=1}}
{{#set: nb gene associated=6}}
+
{{#set: nb pathway associated=0}}
{{#set: nb pathway associated=1}}
+
{{#set: reconstruction category=orthology}}
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction tool=pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}

Revision as of 08:37, 15 March 2021

Reaction MCDH_LPAREN_2mb2coa_RPAREN_

  • direction:
    • left-to-right
  • common-name:
    • 2-methylacyl-coa dehydrogenase, trans-2-methylbut-2-enoyl-coa forming

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links