Difference between revisions of "ISOLEUCINE--TRNA-LIGASE-RXN"
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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8795 RXN-8795] == * direction: ** left-to-right * common-name: ** dihydrogeranylgeranyl-bacteri...") |
(Created page with "Category:reaction == Reaction ISOLEUCINE--TRNA-LIGASE-RXN == * direction: ** left-to-right * common-name: ** isoleucine-trna ligase * ec-number: ** [http://enzyme.expasy.o...") |
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(7 intermediate revisions by 3 users not shown) | |||
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[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction | + | == Reaction ISOLEUCINE--TRNA-LIGASE-RXN == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
* common-name: | * common-name: | ||
− | ** | + | ** isoleucine-trna ligase |
+ | * ec-number: | ||
+ | ** [http://enzyme.expasy.org/EC/6.1.1.5 ec-6.1.1.5] | ||
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[ATP]][c] '''+''' 1 [[ILE]][c] '''+''' 1 [[ILE-tRNAs]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Charged-ILE-tRNAs]][c] '''+''' 1 [[PPI]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | * Gene: [[SJ03174]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | * Gene: [[SJ16361]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ03173]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
+ | * [[TRNA-CHARGING-PWY]], tRNA charging: | ||
+ | ** '''21''' reactions found over '''21''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
+ | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
+ | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
+ | * METANETX-RXN : MNXR115986 | ||
+ | * RHEA: | ||
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11061 11061] | ||
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R03656 R03656] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/P18330 P18330] | ||
+ | ** [http://www.uniprot.org/uniprot/P36422 P36422] | ||
+ | ** [http://www.uniprot.org/uniprot/O29622 O29622] | ||
+ | ** [http://www.uniprot.org/uniprot/P47587 P47587] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9ZCU4 Q9ZCU4] | ||
+ | ** [http://www.uniprot.org/uniprot/P46213 P46213] | ||
+ | ** [http://www.uniprot.org/uniprot/P41257 P41257] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9JVY4 Q9JVY4] | ||
+ | ** [http://www.uniprot.org/uniprot/Q58357 Q58357] | ||
+ | ** [http://www.uniprot.org/uniprot/O83466 O83466] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9Z972 Q9Z972] | ||
+ | ** [http://www.uniprot.org/uniprot/P56456 P56456] | ||
+ | ** [http://www.uniprot.org/uniprot/O58792 O58792] | ||
+ | ** [http://www.uniprot.org/uniprot/O84022 O84022] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9ZJJ1 Q9ZJJ1] | ||
+ | ** [http://www.uniprot.org/uniprot/O66651 O66651] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9CEH8 Q9CEH8] | ||
+ | ** [http://www.uniprot.org/uniprot/O27428 O27428] | ||
+ | ** [http://www.uniprot.org/uniprot/Q45477 Q45477] | ||
+ | ** [http://www.uniprot.org/uniprot/O51773 O51773] | ||
+ | ** [http://www.uniprot.org/uniprot/P46207 P46207] | ||
+ | ** [http://www.uniprot.org/uniprot/P41252 P41252] | ||
+ | ** [http://www.uniprot.org/uniprot/P41972 P41972] | ||
+ | ** [http://www.uniprot.org/uniprot/P48526 P48526] | ||
+ | ** [http://www.uniprot.org/uniprot/P75258 P75258] | ||
+ | ** [http://www.uniprot.org/uniprot/P73505 P73505] | ||
+ | ** [http://www.uniprot.org/uniprot/Q49024 Q49024] | ||
+ | ** [http://www.uniprot.org/uniprot/Q49074 Q49074] | ||
+ | ** [http://www.uniprot.org/uniprot/P43824 P43824] | ||
+ | ** [http://www.uniprot.org/uniprot/P09436 P09436] | ||
+ | ** [http://www.uniprot.org/uniprot/P00956 P00956] | ||
+ | ** [http://www.uniprot.org/uniprot/Q94425 Q94425] | ||
+ | </div> | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
− | {{#set: common-name= | + | {{#set: common-name=isoleucine-trna ligase}} |
− | {{#set: nb gene associated= | + | {{#set: ec-number=ec-6.1.1.5}} |
− | {{#set: nb pathway associated= | + | {{#set: nb gene associated=3}} |
− | {{#set: reconstruction category=annotation}} | + | {{#set: nb pathway associated=1}} |
− | {{#set: reconstruction tool=pathwaytools}} | + | {{#set: reconstruction category=orthology|annotation}} |
+ | {{#set: reconstruction tool=pathwaytools|pantograph}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source=saccharina_japonica_genome}} | + | {{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}} |
Latest revision as of 11:19, 18 March 2021
Contents
Reaction ISOLEUCINE--TRNA-LIGASE-RXN
- direction:
- left-to-right
- common-name:
- isoleucine-trna ligase
- ec-number:
Reaction formula
Gene(s) associated with this reaction
- Gene: SJ03174
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ16361
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ03173
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- TRNA-CHARGING-PWY, tRNA charging:
- 21 reactions found over 21 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links