Difference between revisions of "ISOVALERYLCOA-DHLIPOAMIDE-RXN"

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(Created page with "Category:reaction == Reaction RIBOFLAVINSYNDEAM-RXN == * direction: ** left-to-right * common-name: ** diaminohydroxyphosphoribosylaminopyrimidine deaminase * ec-number: *...")
(Created page with "Category:reaction == Reaction 2.4.2.38-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.4.2.38 ec-2.4.2.38] == Reaction formula == * 1 [...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RIBOFLAVINSYNDEAM-RXN ==
+
== Reaction 2.4.2.38-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** diaminohydroxyphosphoribosylaminopyrimidine deaminase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.5.4.26 ec-3.5.4.26]
+
** [http://enzyme.expasy.org/EC/2.4.2.38 ec-2.4.2.38]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[DIAMINO-OH-PHOSPHORIBOSYLAMINO-PYR]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[CPD-602]][c]
+
* 1 [[2-2-N-linked-Glycan]][c] '''+''' 1 [[UDP-D-XYLOSE]][c] '''=>''' 1 [[N4-N-ACETYL-BETA-D-GLUCOSAMINYL-X]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[UDP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ22508]]
+
* Gene: [[SJ17017]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ17550]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[RIBOSYN2-PWY]], flavin biosynthesis I (bacteria and plants):
+
* [[PWY-7920]], complex N-linked glycan biosynthesis (plants):
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
** '''2''' reactions found over '''11''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R06016 R06016]
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21869 21869]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10612 10612]
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R03459 R03459]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=diaminohydroxyphosphoribosylaminopyrimidine deaminase}}
+
{{#set: ec-number=ec-2.4.2.38}}
−
{{#set: ec-number=ec-3.5.4.26}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb gene associated=2}}
 
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}

Revision as of 11:23, 15 January 2021

Reaction 2.4.2.38-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7920, complex N-linked glycan biosynthesis (plants):
    • 2 reactions found over 11 reactions in the full pathway

Reconstruction information

External links





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