Difference between revisions of "ISPH2-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-4113 RXN3O-4113] == * direction: ** left-to-right * common-name: ** alcohol dehydrogenase (na...")
(Created page with "Category:reaction == Reaction TransportSeed-CPD-3 == * direction: ** left-to-right == Reaction formula == * 1.0 CPD-3[e] '''=>''' 1.0 CPD-3[c] == Gene(s) associate...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-4113 RXN3O-4113] ==
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== Reaction TransportSeed-CPD-3 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
* common-name:
 
** alcohol dehydrogenase (nad)
 
** tyrosol dehydrogenase
 
* ec-number:
 
** [http://enzyme.expasy.org/EC/1.1.1.1 ec-1.1.1.1]
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[HYDRPHENYLAC-CPD]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD3O-4151]][c] '''+''' 1 [[NAD]][c]
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* 1.0 [[CPD-3]][e] '''=>''' 1.0 [[CPD-3]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ21601]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ07759]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ14768]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-6802]], salidroside biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6802 PWY-6802]
 
** '''3''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY3O-4108]], L-tyrosine degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-4108 PWY3O-4108]
 
** '''2''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[manual]]; source: [[import_from_medium]]; tool: [[curation]]; comment: added to manage seeds from extracellular to cytosol compartment
 
== External links  ==
 
== External links  ==
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R04304 R04304]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=alcohol dehydrogenase (nad)|tyrosol dehydrogenase}}
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{{#set: nb gene associated=0}}
{{#set: ec-number=ec-1.1.1.1}}
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{{#set: nb pathway associated=0}}
{{#set: nb gene associated=3}}
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{{#set: reconstruction category=manual}}
{{#set: nb pathway associated=2}}
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{{#set: reconstruction tool=curation}}
{{#set: reconstruction category=annotation}}
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{{#set: reconstruction comment=added to manage seeds from extracellular to cytosol compartment}}
{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=import_from_medium}}
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 

Revision as of 20:41, 18 December 2020

Reaction TransportSeed-CPD-3

  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links