Difference between revisions of "KARI LPAREN 23dhmp RPAREN"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction 1.5.1.11-RXN == * direction: ** left-to-right * common-name: ** d-octopine dehydrogenase * ec-number: ** [http://enzyme.expasy.org/EC/1.5.1.1...")
(Created page with "Category:reaction == Reaction 2.1.1.100-RXN == * direction: ** left-to-right * common-name: ** protein-s-isoprenylcysteine o-methyltransferase ** protein c-terminal s-isop...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 1.5.1.11-RXN ==
+
== Reaction 2.1.1.100-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** d-octopine dehydrogenase
+
** protein-s-isoprenylcysteine o-methyltransferase
 +
** protein c-terminal s-isoprenylcysteine carboxyl o-methyltransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.5.1.11 ec-1.5.1.11]
+
** [http://enzyme.expasy.org/EC/2.1.1.100 ec-2.1.1.100]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ARG]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[PYRUVATE]][c] '''=>''' 1 [[CPD-309]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[PROTEIN-C-TERMINAL-S-ETC-CYSTEINE]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTEIN-C-TERMINAL-S-FARNESYL-L-CYSTEINE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ15888]]
+
* Gene: [[SJ02372]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ17565]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7351]], pyruvate fermentation to opines:
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16287 16287]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00562 R00562]
+
** [http://www.genome.jp/dbget-bin/www_bget?R04496 R04496]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P87014 P87014]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=d-octopine dehydrogenase}}
+
{{#set: common-name=protein c-terminal s-isoprenylcysteine carboxyl o-methyltransferase|protein-s-isoprenylcysteine o-methyltransferase}}
−
{{#set: ec-number=ec-1.5.1.11}}
+
{{#set: ec-number=ec-2.1.1.100}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 15:03, 5 January 2021

Reaction 2.1.1.100-RXN

  • direction:
    • left-to-right
  • common-name:
    • protein-s-isoprenylcysteine o-methyltransferase
    • protein c-terminal s-isoprenylcysteine carboxyl o-methyltransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=KARI_LPAREN_23dhmp_RPAREN&oldid=62987"