Difference between revisions of "KETOACYLCOATHIOL-RXN"
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(Created page with "Category:reaction == Reaction RXN-10060 == * direction: ** left-to-right * common-name: ** 3-oxocerotoyl-[acp] reductase ** 3-oxoacyl-[acyl-carrier-protein] reductase (nad...") |
(Created page with "Category:reaction == Reaction KETOACYLCOATHIOL-RXN == * direction: ** left-to-right * common-name: ** acetyl-coa c-acyltransferase ** 3-ketoacyl-coa thiolase * ec-number:...") |
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(5 intermediate revisions by 3 users not shown) | |||
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[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction RXN | + | == Reaction KETOACYLCOATHIOL-RXN == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
* common-name: | * common-name: | ||
− | ** | + | ** acetyl-coa c-acyltransferase |
− | ** 3- | + | ** 3-ketoacyl-coa thiolase |
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/2.3.1.16 ec-2.3.1.16] |
+ | * synonymous: | ||
+ | ** beta-ketothiolase | ||
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[3- | + | * 1 [[3-KETOACYL-COA]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[Saturated-Fatty-Acyl-CoA]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | * Gene: [[SJ21818]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
− | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
− | * Gene: [[ | + | * Gene: [[SJ16470]] |
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | * Gene: [[SJ21817]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
− | * Gene: [[ | + | * Gene: [[SJ14898]] |
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | * Gene: [[SJ09371]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
− | |||
− | |||
== Pathway(s) == | == Pathway(s) == | ||
− | * [[PWY- | + | * [[PWY-7288]], fatty acid β-oxidation VII (yeast peroxisome): |
− | ** ''' | + | ** '''4''' reactions found over '''5''' reactions in the full pathway |
− | * [[ | + | * [[PWY-5136]], fatty acid β-oxidation II (plant peroxisome): |
− | ** ''' | + | ** '''5''' reactions found over '''5''' reactions in the full pathway |
+ | * [[FAO-PWY]], fatty acid β-oxidation I (generic): | ||
+ | ** '''6''' reactions found over '''7''' reactions in the full pathway | ||
+ | * [[PWY66-391]], fatty acid β-oxidation VI (mammalian peroxisome): | ||
+ | ** '''6''' reactions found over '''7''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | |||
== External links == | == External links == | ||
+ | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
+ | * METANETX-RXN : MNXR115993 | ||
+ | * RHEA: | ||
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21566 21566] | ||
+ | * PIR: | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=XURTAB XURTAB] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=XURTAA XURTAA] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=XURT XURT] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=XUHUAB XUHUAB] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=XUEC XUEC] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T52165 T52165] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T52110 T52110] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T07989 T07989] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S72532 S72532] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S57792 S57792] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S36838 S36838] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S33637 S33637] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S22784 S22784] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JS0624 JS0624] | ||
+ | ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=H64890 H64890] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/P77525 P77525] | ||
+ | ** [http://www.uniprot.org/uniprot/P28790 P28790] | ||
+ | ** [http://www.uniprot.org/uniprot/P27796 P27796] | ||
+ | ** [http://www.uniprot.org/uniprot/Q08375 Q08375] | ||
+ | ** [http://www.uniprot.org/uniprot/Q05493 Q05493] | ||
+ | ** [http://www.uniprot.org/uniprot/Q42918 Q42918] | ||
+ | ** [http://www.uniprot.org/uniprot/Q43742 Q43742] | ||
+ | ** [http://www.uniprot.org/uniprot/Q56WD9 Q56WD9] | ||
+ | ** [http://www.uniprot.org/uniprot/Q570C8 Q570C8] | ||
+ | ** [http://www.uniprot.org/uniprot/P21151 P21151] | ||
+ | ** [http://www.uniprot.org/uniprot/P09110 P09110] | ||
+ | ** [http://www.uniprot.org/uniprot/P13437 P13437] | ||
+ | ** [http://www.uniprot.org/uniprot/P21775 P21775] | ||
+ | ** [http://www.uniprot.org/uniprot/P07871 P07871] | ||
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R00391 R00391] | ||
+ | </div> | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
− | {{#set: common-name= | + | {{#set: common-name=acetyl-coa c-acyltransferase|3-ketoacyl-coa thiolase}} |
− | {{#set: ec-number=ec- | + | {{#set: ec-number=ec-2.3.1.16}} |
− | {{#set: nb gene associated= | + | {{#set: synonymous=beta-ketothiolase}} |
− | {{#set: nb pathway associated= | + | {{#set: nb gene associated=5}} |
− | {{#set: reconstruction category=annotation | + | {{#set: nb pathway associated=4}} |
− | {{#set: reconstruction tool=pathwaytools | + | {{#set: reconstruction category=annotation}} |
+ | {{#set: reconstruction tool=pathwaytools}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source=saccharina_japonica_genome | + | {{#set: reconstruction source=saccharina_japonica_genome}} |
Latest revision as of 11:24, 18 March 2021
Contents
Reaction KETOACYLCOATHIOL-RXN
- direction:
- left-to-right
- common-name:
- acetyl-coa c-acyltransferase
- 3-ketoacyl-coa thiolase
- ec-number:
- synonymous:
- beta-ketothiolase
Reaction formula
- 1 3-KETOACYL-COA[c] + 1 CO-A[c] => 1 ACETYL-COA[c] + 1 Saturated-Fatty-Acyl-CoA[c]
Gene(s) associated with this reaction
- Gene: SJ21818
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ16470
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ21817
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ14898
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ09371
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-7288, fatty acid β-oxidation VII (yeast peroxisome):
- 4 reactions found over 5 reactions in the full pathway
- PWY-5136, fatty acid β-oxidation II (plant peroxisome):
- 5 reactions found over 5 reactions in the full pathway
- FAO-PWY, fatty acid β-oxidation I (generic):
- 6 reactions found over 7 reactions in the full pathway
- PWY66-391, fatty acid β-oxidation VI (mammalian peroxisome):
- 6 reactions found over 7 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links