Difference between revisions of "KETOLACTOSE-RXN"

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(Created page with "Category:reaction == Reaction RXN-11586 == * direction: ** left-to-right * common-name: ** 23s rrna m2a2503 methyltransferase * ec-number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:reaction == Reaction RXN-12625 == * direction: ** left-to-right * common-name: ** n,n'-diacetylchitobiose β-n-acetylglucosaminidase * ec-number: ** [http://e...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-11586 ==
+
== Reaction RXN-12625 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** 23s rrna m2a2503 methyltransferase
+
** n,n'-diacetylchitobiose β-n-acetylglucosaminidase
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/2.1.1.192 ec-2.1.1.192]
+
** [http://enzyme.expasy.org/EC/3.2.1.52 ec-3.2.1.52]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[23S-rRNA-adenine-2503]][c] '''+''' 2 [[Reduced-2Fe-2S-Ferredoxins]][c] '''+''' 2 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[23S-rRNA-2-methyladenine2503]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[CH33ADO]][c] '''+''' 1 [[MET]][c] '''+''' 2 [[Oxidized-2Fe-2S-Ferredoxins]][c]
+
* 1 [[CHITOBIOSE]][c] '''+''' 1 [[WATER]][c] '''=>''' 2 [[N-acetyl-D-glucosamine]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ03258]]
+
* Gene: [[SJ10675]]
** Category: [[annotation]]
+
** Category: [[orthology]]
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
* Gene: [[SJ18598]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ00670]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ20556]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-7822]], chitin degradation III (Serratia):
 +
** '''2''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6902]], chitin degradation II (Vibrio):
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00022 R00022]
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=42917 42917]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30674 30674]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=23s rrna m2a2503 methyltransferase}}
+
{{#set: common-name=n,n'-diacetylchitobiose β-n-acetylglucosaminidase}}
{{#set: ec-number=ec-2.1.1.192}}
+
{{#set: ec-number=ec-3.2.1.52}}
{{#set: nb gene associated=4}}
+
{{#set: nb gene associated=1}}
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=2}}
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology}}
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}

Revision as of 15:01, 5 January 2021

Reaction RXN-12625

  • direction:
    • left-to-right
  • common-name:
    • n,n'-diacetylchitobiose β-n-acetylglucosaminidase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7822, chitin degradation III (Serratia):
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-6902, chitin degradation II (Vibrio):
    • 3 reactions found over 5 reactions in the full pathway

Reconstruction information

External links