Difference between revisions of "Keratan-sulfate-NAcGlcN6S"

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(Created page with "Category:gene == Gene SJ08764 == * transcription-direction: ** positive * right-end-position: ** 26451 * left-end-position: ** 16878 * centisome-position: ** 3.9081748...")
(Created page with "Category:gene == Gene SJ03340 == * transcription-direction: ** negative * right-end-position: ** 88243 * left-end-position: ** 77265 * centisome-position: ** 63.167316...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ08764 ==
+
== Gene SJ03340 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 26451
+
** 88243
 
* left-end-position:
 
* left-end-position:
−
** 16878
+
** 77265
 
* centisome-position:
 
* centisome-position:
−
** 3.9081748    
+
** 63.167316    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[3.1.27.1-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[1.1.1.145-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[RXN-12693]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
** Category: [[annotation]]
−
{{#set: transcription-direction=positive}}
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: right-end-position=26451}}
+
* [[RXN-12747]]
−
{{#set: left-end-position=16878}}
+
** Category: [[annotation]]
−
{{#set: centisome-position=3.9081748   }}
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12789]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN66-342]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN66-350]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN66-353]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 +
== Pathway(s) associated ==
 +
* [[PWY-6946]]
 +
** '''6''' reactions found over '''22''' reactions in the full pathway
 +
* [[PWY-6944]]
 +
** '''2''' reactions found over '''25''' reactions in the full pathway
 +
* [[PWY-6948]]
 +
** '''2''' reactions found over '''18''' reactions in the full pathway
 +
* [[PWY66-378]]
 +
** '''3''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-7299]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=88243}}
 +
{{#set: left-end-position=77265}}
 +
{{#set: centisome-position=63.167316   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=7}}
 +
{{#set: nb pathway associated=5}}

Revision as of 09:28, 27 August 2019

Gene SJ03340

  • transcription-direction:
    • negative
  • right-end-position:
    • 88243
  • left-end-position:
    • 77265
  • centisome-position:
    • 63.167316

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6946
    • 6 reactions found over 22 reactions in the full pathway
  • PWY-6944
    • 2 reactions found over 25 reactions in the full pathway
  • PWY-6948
    • 2 reactions found over 18 reactions in the full pathway
  • PWY66-378
    • 3 reactions found over 6 reactions in the full pathway
  • PWY-7299
    • 1 reactions found over 2 reactions in the full pathway




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