Difference between revisions of "Keratan-sulfate-NAcGlcN6S"

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(Created page with "Category:gene == Gene SJ03340 == * transcription-direction: ** negative * right-end-position: ** 88243 * left-end-position: ** 77265 * centisome-position: ** 63.167316...")
(Created page with "Category:metabolite == Metabolite 2-OCTAPRENYL-6-HYDROXYPHENOL == * common-name: ** 3-(all-trans-octaprenyl)benzene-1,2-diol * smiles: ** cc(=cccc(=cccc(=cccc(=cccc(=cccc(...")
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[[Category:gene]]
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[[Category:metabolite]]
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== Gene SJ03340 ==
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== Metabolite 2-OCTAPRENYL-6-HYDROXYPHENOL ==
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* transcription-direction:
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* common-name:
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** negative
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** 3-(all-trans-octaprenyl)benzene-1,2-diol
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* right-end-position:
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* smiles:
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** 88243
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** cc(=cccc(=cccc(=cccc(=cccc(=cccc(=cccc(=cccc(=ccc1(c(o)=c(o)c=cc=1))c)c)c)c)c)c)c)c
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* left-end-position:
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* inchi-key:
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** 77265
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** ynpgymzvnlizld-bqfktqoqsa-n
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* centisome-position:
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* molecular-weight:
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** 63.167316   
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** 655.058
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to consume the compound ==
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* [[S.japonica_carotenoid_curated]]
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* [[2-OCTAPRENYL-6-OHPHENOL-METHY-RXN]]
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== Reaction(s) associated ==
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== Reaction(s) known to produce the compound ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[2-OCTAPRENYLPHENOL-HYDROX-RXN]]
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* [[1.1.1.145-RXN]]
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== Reaction(s) of unknown directionality ==
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** Category: [[annotation]]
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{{#set: common-name=3-(all-trans-octaprenyl)benzene-1,2-diol}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: inchi-key=inchikey=ynpgymzvnlizld-bqfktqoqsa-n}}
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* [[RXN-12693]]
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{{#set: molecular-weight=655.058}}
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-12747]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-12789]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN66-342]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN66-350]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN66-353]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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</div>
 
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== Pathway(s) associated ==
 
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* [[PWY-6946]]
 
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** '''6''' reactions found over '''22''' reactions in the full pathway
 
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* [[PWY-6944]]
 
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** '''2''' reactions found over '''25''' reactions in the full pathway
 
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* [[PWY-6948]]
 
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** '''2''' reactions found over '''18''' reactions in the full pathway
 
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* [[PWY66-378]]
 
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** '''3''' reactions found over '''6''' reactions in the full pathway
 
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* [[PWY-7299]]
 
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** '''1''' reactions found over '''2''' reactions in the full pathway
 
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{{#set: transcription-direction=negative}}
 
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{{#set: right-end-position=88243}}
 
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{{#set: left-end-position=77265}}
 
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{{#set: centisome-position=63.167316    }}
 
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{{#set: organism associated=S.japonica_carotenoid_curated}}
 
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{{#set: nb reaction associated=7}}
 
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{{#set: nb pathway associated=5}}
 

Revision as of 20:32, 18 December 2020

Metabolite 2-OCTAPRENYL-6-HYDROXYPHENOL

  • common-name:
    • 3-(all-trans-octaprenyl)benzene-1,2-diol
  • smiles:
    • cc(=cccc(=cccc(=cccc(=cccc(=cccc(=cccc(=cccc(=ccc1(c(o)=c(o)c=cc=1))c)c)c)c)c)c)c)c
  • inchi-key:
    • ynpgymzvnlizld-bqfktqoqsa-n
  • molecular-weight:
    • 655.058

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

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