Difference between revisions of "L-ASPARTATE-OXID-RXN"

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(Created page with "Category:reaction == Reaction RXN-11478 == * direction: ** left-to-right * common-name: ** enoylglutaryl-[acp] methyl ester reductase * ec-number: ** [http://enzyme.expasy...")
(Created page with "Category:reaction == Reaction 4.3.1.17-RXN == * direction: ** left-to-right * common-name: ** l-serine ammonia-lyase * ec-number: ** [http://enzyme.expasy.org/EC/4.3.1.17...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-11478 ==
+
== Reaction 4.3.1.17-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** enoylglutaryl-[acp] methyl ester reductase
+
** l-serine ammonia-lyase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.3.1.9 ec-1.3.1.9]
+
** [http://enzyme.expasy.org/EC/4.3.1.17 ec-4.3.1.17]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[Enoylglutaryl-ACP-methyl-esters]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[Glutaryl-ACP-methyl-esters]][c] '''+''' 1 [[NAD]][c]
+
* 1 [[SER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[PYRUVATE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ03883]]
+
* Gene: [[SJ15468]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ08066]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ00320]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6519]], 8-amino-7-oxononanoate biosynthesis I:
 
−
** '''9''' reactions found over '''11''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19170 19170]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00220 R00220]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q7M194 Q7M194]
 +
** [http://www.uniprot.org/uniprot/P30744 P30744]
 +
** [http://www.uniprot.org/uniprot/Q9JX54 Q9JX54]
 +
** [http://www.uniprot.org/uniprot/P56072 P56072]
 +
** [http://www.uniprot.org/uniprot/P25379 P25379]
 +
** [http://www.uniprot.org/uniprot/P16095 P16095]
 +
** [http://www.uniprot.org/uniprot/P20132 P20132]
 +
** [http://www.uniprot.org/uniprot/P09367 P09367]
 +
** [http://www.uniprot.org/uniprot/Q9PM51 Q9PM51]
 +
** [http://www.uniprot.org/uniprot/P17324 P17324]
 +
** [http://www.uniprot.org/uniprot/P80212 P80212]
 +
** [http://www.uniprot.org/uniprot/P80213 P80213]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=enoylglutaryl-[acp] methyl ester reductase}}
+
{{#set: common-name=l-serine ammonia-lyase}}
−
{{#set: ec-number=ec-1.3.1.9}}
+
{{#set: ec-number=ec-4.3.1.17}}
 
{{#set: nb gene associated=2}}
 
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=0}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}

Revision as of 13:21, 14 January 2021

Reaction 4.3.1.17-RXN

  • direction:
    • left-to-right
  • common-name:
    • l-serine ammonia-lyase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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