Difference between revisions of "LEUCINE--TRNA-LIGASE-RXN"

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(Created page with "Category:reaction == Reaction GLYRIBONUCSYN-RXN == * direction: ** left-to-right * common-name: ** phosphoribosylamine-glycine ligase * ec-number: ** [http://enzyme.expasy...")
(Created page with "Category:reaction == Reaction SULFITE-OXIDASE-RXN == * direction: ** left-to-right * common-name: ** sulfite oxidase * ec-number: ** [http://enzyme.expasy.org/EC/1.8.3.1 e...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction GLYRIBONUCSYN-RXN ==
+
== Reaction SULFITE-OXIDASE-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** phosphoribosylamine-glycine ligase
+
** sulfite oxidase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/6.3.4.13 ec-6.3.4.13]
+
** [http://enzyme.expasy.org/EC/1.8.3.1 ec-1.8.3.1]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[5-P-BETA-D-RIBOSYL-AMINE]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[GLY]][c] '''=>''' 1 [[5-PHOSPHO-RIBOSYL-GLYCINEAMIDE]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
+
* 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[SO3]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[SULFATE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ06408]]
+
* Gene: [[SJ08442]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ08443]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
Line 16: Line 22:
 
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6277]], superpathway of 5-aminoimidazole ribonucleotide biosynthesis:
+
* [[PWY-5326]], sulfite oxidation IV (sulfite oxidase):
−
** '''6''' reactions found over '''5''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[PWY-6121]], 5-aminoimidazole ribonucleotide biosynthesis I:
+
* [[PWY-7927]], sulfide oxidation IV (mitochondria):
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''2''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-6122]], 5-aminoimidazole ribonucleotide biosynthesis II:
 
−
** '''4''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* METANETX-RXN : MNXR104649
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17453 17453]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24601 24601]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R04144 R04144]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00533 R00533]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P07244 P07244]
+
** [http://www.uniprot.org/uniprot/P07850 P07850]
−
** [http://www.uniprot.org/uniprot/Q58347 Q58347]
+
** [http://www.uniprot.org/uniprot/Q07116 Q07116]
−
** [http://www.uniprot.org/uniprot/P12039 P12039]
+
** [http://www.uniprot.org/uniprot/P51687 P51687]
−
** [http://www.uniprot.org/uniprot/P21872 P21872]
+
** [http://www.uniprot.org/uniprot/Q9XTQ8 Q9XTQ8]
−
** [http://www.uniprot.org/uniprot/P15640 P15640]
 
−
** [http://www.uniprot.org/uniprot/P00967 P00967]
 
−
** [http://www.uniprot.org/uniprot/P16340 P16340]
 
−
** [http://www.uniprot.org/uniprot/P22102 P22102]
 
−
** [http://www.uniprot.org/uniprot/Q9JWU6 Q9JWU6]
 
−
** [http://www.uniprot.org/uniprot/P43845 P43845]
 
−
** [http://www.uniprot.org/uniprot/Q9PN47 Q9PN47]
 
−
** [http://www.uniprot.org/uniprot/Q64737 Q64737]
 
−
** [http://www.uniprot.org/uniprot/P20772 P20772]
 
−
** [http://www.uniprot.org/uniprot/P26977 P26977]
 
−
** [http://www.uniprot.org/uniprot/Q59492 Q59492]
 
−
** [http://www.uniprot.org/uniprot/P74232 P74232]
 
−
** [http://www.uniprot.org/uniprot/Q42804 Q42804]
 
−
** [http://www.uniprot.org/uniprot/P52421 P52421]
 
−
</div>
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=phosphoribosylamine-glycine ligase}}
+
{{#set: common-name=sulfite oxidase}}
−
{{#set: ec-number=ec-6.3.4.13}}
+
{{#set: ec-number=ec-1.8.3.1}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=2}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}

Revision as of 08:39, 15 March 2021

Reaction SULFITE-OXIDASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • sulfite oxidase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5326, sulfite oxidation IV (sulfite oxidase):
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-7927, sulfide oxidation IV (mitochondria):
    • 2 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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