Difference between revisions of "LYS2-peptidyl-carrier-protein"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14270 RXN-14270] == * direction: ** left-to-right * common-name: ** 5-amino-4-imidazolecarboxam...")
(Created page with "Category:gene == Gene SJ16137 == * transcription-direction: ** negative * right-end-position: ** 259183 * left-end-position: ** 244815 * centisome-position: ** 85.347786...")
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14270 RXN-14270] ==
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== Gene SJ16137 ==
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* direction:
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* transcription-direction:
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** left-to-right
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** negative
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* common-name:
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* right-end-position:
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** 5-amino-4-imidazolecarboxamide phosphoribosyltransferase
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** 259183
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* ec-number:
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* left-end-position:
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** [http://enzyme.expasy.org/EC/2.4.2.7 ec-2.4.2.7]
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** 244815
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== Reaction formula ==
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* centisome-position:
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* 1 [[CPD-3762]][c] '''+''' 1 [[PRPP]][c] '''=>''' 1 [[AICAR]][c] '''+''' 1 [[PPI]][c]
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** 85.347786   
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== Gene(s) associated with this reaction  ==
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== Organism(s) associated with this gene  ==
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* Gene: [[SJ15126]]
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* [[S.japonica_carotenoid_curated]]
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== Reaction(s) associated ==
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* [[ATPASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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** Category: [[annotation]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Pathway(s)  ==
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* [[RXN-11109]]
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== Reconstruction information  ==
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** Category: [[annotation]]
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-12195]]
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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** Category: [[annotation]]
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== External links  ==
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* RHEA:
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* [[RXN-12196]]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31138 31138]
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** Category: [[annotation]]
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* LIGAND-RXN:
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** [http://www.genome.jp/dbget-bin/www_bget?R04378 R04378]
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* [[RXN0-5462]]
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{{#set: direction=left-to-right}}
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** Category: [[annotation]]
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{{#set: common-name=5-amino-4-imidazolecarboxamide phosphoribosyltransferase}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: ec-number=ec-2.4.2.7}}
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== Pathway(s) associated ==
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{{#set: nb gene associated=1}}
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* [[PWY-7210]]
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{{#set: nb pathway associated=0}}
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** '''8''' reactions found over '''8''' reactions in the full pathway
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{{#set: reconstruction category=orthology|annotation}}
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* [[PWY-7198]]
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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** '''6''' reactions found over '''7''' reactions in the full pathway
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{{#set: reconstruction comment=n.a}}
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* [[PWY-7184]]
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{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana}}
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** '''9''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-6545]]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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{{#set: transcription-direction=negative}}
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{{#set: right-end-position=259183}}
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{{#set: left-end-position=244815}}
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{{#set: centisome-position=85.347786    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=6}}
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{{#set: nb pathway associated=4}}

Revision as of 09:28, 27 August 2019

Gene SJ16137

  • transcription-direction:
    • negative
  • right-end-position:
    • 259183
  • left-end-position:
    • 244815
  • centisome-position:
    • 85.347786

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=LYS2-peptidyl-carrier-protein&oldid=34183"