Difference between revisions of "Linear-Malto-Oligosaccharides"

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(Created page with "Category:gene == Gene SJ13208 == * transcription-direction: ** positive * right-end-position: ** 343133 * left-end-position: ** 341850 * centisome-position: ** 99.16686...")
(Created page with "Category:metabolite == Metabolite CPD-17070 == * common-name: ** fe-coproporphyrin iii * smiles: ** cc1(=c8(c=c4(c(c)=c(ccc([o-])=o)c5(c=c3(c(ccc([o-])=o)=c(c)c2(=cc7(c(cc...")
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[[Category:gene]]
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[[Category:metabolite]]
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== Gene SJ13208 ==
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== Metabolite CPD-17070 ==
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* transcription-direction:
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* common-name:
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** positive
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** fe-coproporphyrin iii
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* right-end-position:
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* smiles:
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** 343133
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** cc1(=c8(c=c4(c(c)=c(ccc([o-])=o)c5(c=c3(c(ccc([o-])=o)=c(c)c2(=cc7(c(ccc(=o)[o-])=c(c)c6(=cc(=c(ccc([o-])=o)1)n([fe--](n23)([n+]4=5)[n+]6=7)8))))))))
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* left-end-position:
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* inchi-key:
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** 341850
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** sxdinbxhohhtmy-rggahwmasa-h
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* centisome-position:
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* molecular-weight:
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** 99.16686   
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** 704.518
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to consume the compound ==
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* [[S.japonica_carotenoid_curated]]
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== Reaction(s) known to produce the compound ==
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== Reaction(s) associated ==
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* [[RXN-17518]]
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* [[ATPASE-RXN]]
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== Reaction(s) of unknown directionality ==
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** Category: [[annotation]]
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{{#set: common-name=fe-coproporphyrin iii}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: inchi-key=inchikey=sxdinbxhohhtmy-rggahwmasa-h}}
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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{{#set: molecular-weight=704.518}}
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-12195]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-12196]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN0-5462]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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== Pathway(s) associated ==
 
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* [[PWY-7210]]
 
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** '''8''' reactions found over '''8''' reactions in the full pathway
 
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* [[PWY-7198]]
 
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** '''6''' reactions found over '''7''' reactions in the full pathway
 
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* [[PWY-7184]]
 
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** '''9''' reactions found over '''9''' reactions in the full pathway
 
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* [[PWY-6545]]
 
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** '''8''' reactions found over '''9''' reactions in the full pathway
 
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{{#set: transcription-direction=positive}}
 
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{{#set: right-end-position=343133}}
 
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{{#set: left-end-position=341850}}
 
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{{#set: centisome-position=99.16686    }}
 
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{{#set: organism associated=S.japonica_carotenoid_curated}}
 
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{{#set: nb reaction associated=5}}
 
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{{#set: nb pathway associated=4}}
 

Revision as of 20:33, 18 December 2020

Metabolite CPD-17070

  • common-name:
    • fe-coproporphyrin iii
  • smiles:
    • cc1(=c8(c=c4(c(c)=c(ccc([o-])=o)c5(c=c3(c(ccc([o-])=o)=c(c)c2(=cc7(c(ccc(=o)[o-])=c(c)c6(=cc(=c(ccc([o-])=o)1)n([fe--](n23)([n+]4=5)[n+]6=7)8))))))))
  • inchi-key:
    • sxdinbxhohhtmy-rggahwmasa-h
  • molecular-weight:
    • 704.518

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

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