Difference between revisions of "Lipoyl-Protein-N6-lipoyllysine"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.117-RXN 2.4.1.117-RXN] == * direction: ** left-to-right * common-name: ** udp-glucose:dolichy...")
(Created page with "Category:metabolite == Metabolite 3Z-PHYCOERYTHROBILIN == * common-name: ** (3z)-phycoerythrobilin * smiles: ** cc=c1(c(c)c(nc1=cc4(=c(c)c(ccc([o-])=o)=c(c=c2(c(ccc([o-])=...")
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[[Category:reaction]]
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[[Category:metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.117-RXN 2.4.1.117-RXN] ==
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== Metabolite 3Z-PHYCOERYTHROBILIN ==
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* direction:
 
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** left-to-right
 
 
* common-name:
 
* common-name:
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** udp-glucose:dolichyl-phosphate glucosyltransferase
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** (3z)-phycoerythrobilin
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* ec-number:
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* smiles:
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** [http://enzyme.expasy.org/EC/2.4.1.117 ec-2.4.1.117]
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** cc=c1(c(c)c(nc1=cc4(=c(c)c(ccc([o-])=o)=c(c=c2(c(ccc([o-])=o)=c(c)c(=n2)c[ch]3(c(c)=c(c=c)c(=o)n3)))n4))=o)
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== Reaction formula ==
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* inchi-key:
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* 1 [[CPD-12575]][c] '''+''' 1 [[DOLICHOLP]][c] '''=>''' 1 [[CPD-166]][c] '''+''' 1 [[UDP]][c]
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** igjxaxffkkrfku-isrbknaysa-l
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== Gene(s) associated with this reaction  ==
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* molecular-weight:
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* Gene: [[SJ17231]]
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** 584.671
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** Category: [[annotation]]
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== Reaction(s) known to consume the compound ==
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [[R05819]]
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** Category: [[orthology]]
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== Reaction(s) known to produce the compound ==
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* [[1.3.7.3-RXN]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* [[R05819]]
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== Pathway(s) ==
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== Reaction(s) of unknown directionality ==
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* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]], protein N-glycosylation initial phase (eukaryotic): [http://metacyc.org/META/NEW-IMAGE?object=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]
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{{#set: common-name=(3z)-phycoerythrobilin}}
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** '''16''' reactions found over '''19''' reactions in the full pathway
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{{#set: inchi-key=inchikey=igjxaxffkkrfku-isrbknaysa-l}}
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== Reconstruction information  ==
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{{#set: molecular-weight=584.671}}
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
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== External links  ==
 
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* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15402 15402]
 
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R01005 R01005]
 
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/P40350 P40350]
 
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** [http://www.uniprot.org/uniprot/Q9UUT0 Q9UUT0]
 
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** [http://www.uniprot.org/uniprot/Q9Y673 Q9Y673]
 
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{{#set: direction=left-to-right}}
 
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{{#set: common-name=udp-glucose:dolichyl-phosphate glucosyltransferase}}
 
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{{#set: ec-number=ec-2.4.1.117}}
 
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{{#set: nb gene associated=1}}
 
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{{#set: nb pathway associated=1}}
 
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{{#set: reconstruction category=annotation|orthology}}
 
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{{#set: reconstruction tool=pantograph|pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome|output_pantograph_arabidopsis_thaliana}}
 

Revision as of 20:35, 18 December 2020

Metabolite 3Z-PHYCOERYTHROBILIN

  • common-name:
    • (3z)-phycoerythrobilin
  • smiles:
    • cc=c1(c(c)c(nc1=cc4(=c(c)c(ccc([o-])=o)=c(c=c2(c(ccc([o-])=o)=c(c)c(=n2)c[ch]3(c(c)=c(c=c)c(=o)n3)))n4))=o)
  • inchi-key:
    • igjxaxffkkrfku-isrbknaysa-l
  • molecular-weight:
    • 584.671

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

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