Difference between revisions of "Llcoas"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2-OCTAPRENYL-6-OHPHENOL-METHY-RXN 2-OCTAPRENYL-6-OHPHENOL-METHY-RXN] == * direction: ** left-to-rig...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-6524 RXN0-6524] == * direction: ** left-to-right * common-name: ** ribonuclease * ec-number: *...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2-OCTAPRENYL-6-OHPHENOL-METHY-RXN 2-OCTAPRENYL-6-OHPHENOL-METHY-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-6524 RXN0-6524] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** 2-octaprenyl-6-hydroxyphenyl methylase
+
** ribonuclease
−
** 2-octaprenyl-6-hydroxyphenol methylase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.1.1.222 ec-2.1.1.222]
+
** [http://enzyme.expasy.org/EC/3.1.13.1 ec-3.1.13.1]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-OCTAPRENYL-6-HYDROXYPHENOL]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[2-OCTAPRENYL-6-METHOXYPHENOL]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c]
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* 1 [[RNASE-II-POLY-A-SUBSTRATE-MRNA]][c] '''+''' n [[WATER]][c] '''=>''' n [[AMP]][c] '''+''' 1 [[RNASE-II-SUBSTRATE-WITH-NO-POLY-A-TAIL]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ16864]]
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* Gene: [[SJ19616]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ13007]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6708]], ubiquinol-8 biosynthesis (prokaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6708 PWY-6708]
 
−
** '''5''' reactions found over '''8''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27771 27771]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R04988 R04988]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=2-octaprenyl-6-hydroxyphenyl methylase|2-octaprenyl-6-hydroxyphenol methylase}}
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{{#set: common-name=ribonuclease}}
−
{{#set: ec-number=ec-2.1.1.222}}
+
{{#set: ec-number=ec-3.1.13.1}}
−
{{#set: nb gene associated=2}}
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{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 14:26, 26 August 2019

Reaction RXN0-6524

  • direction:
    • left-to-right
  • common-name:
    • ribonuclease
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

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