Difference between revisions of "MALATE-DEHYDROGENASE-NADP+-RXN"

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(Created page with "Category:reaction == Reaction 2.4.1.38-RXN == * direction: ** left-to-right * common-name: ** β-n-acetylglucosaminylglycopeptide β-1,4-galactosyltransferase * ec...")
(Created page with "Category:reaction == Reaction RXN66-12 == * direction: ** left-to-right * common-name: ** 4,4-dimethyl-14α-hydroxymethyl-5α-cholesta-8-en-3β-ol 14-dehydro...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 2.4.1.38-RXN ==
+
== Reaction RXN66-12 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** β-n-acetylglucosaminylglycopeptide β-1,4-galactosyltransferase
+
** 4,4-dimethyl-14α-hydroxymethyl-5α-cholesta-8-en-3β-ol 14-dehydrogenase
−
* ec-number:
+
** 4,4-dimethyl-14α-hydroxymethyl-5α-cholesta-8-en-3β-ol,nadph:oxygen oxidoreductase
−
** [http://enzyme.expasy.org/EC/2.4.1.38 ec-2.4.1.38]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[BETA-ACETYLGLUCOSAMINIDE]][c] '''+''' 1 [[CPD-14553]][c] '''=>''' 1 [[B-Gal-14-NacGlc-R]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[UDP]][c]
+
* 1 [[CPD-8607]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-8608]][c] '''+''' 1 [[NADP]][c] '''+''' 2 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ14181]]
+
* Gene: [[SJ05072]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7837]], i antigen and I antigen biosynthesis:
+
* [[PWY66-3]], cholesterol biosynthesis II (via 24,25-dihydrolanosterol):
−
** '''3''' reactions found over '''5''' reactions in the full pathway
+
** '''12''' reactions found over '''18''' reactions in the full pathway
−
* [[PWY-7434]], terminal O-glycans residues modification (via type 2 precursor disaccharide):
 
−
** '''5''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-7831]], ABH and Lewis epitopes biosynthesis from type 2 precursor disaccharide:
 
−
** '''2''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY-7833]], biosynthesis of Lewis epitopes (H. pylori):
 
−
** '''2''' reactions found over '''9''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22933 22933]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R04495 R04495]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P15535 P15535]
 
−
** [http://www.uniprot.org/uniprot/P15291 P15291]
 
−
** [http://www.uniprot.org/uniprot/Q7LZ60 Q7LZ60]
 
−
** [http://www.uniprot.org/uniprot/P08037 P08037]
 
−
** [http://www.uniprot.org/uniprot/Q90580 Q90580]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=β-n-acetylglucosaminylglycopeptide β-1,4-galactosyltransferase}}
+
{{#set: common-name=4,4-dimethyl-14α-hydroxymethyl-5α-cholesta-8-en-3β-ol 14-dehydrogenase|4,4-dimethyl-14α-hydroxymethyl-5α-cholesta-8-en-3β-ol,nadph:oxygen oxidoreductase}}
−
{{#set: ec-number=ec-2.4.1.38}}
 
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 11:24, 15 January 2021

Reaction RXN66-12

  • direction:
    • left-to-right
  • common-name:
    • 4,4-dimethyl-14α-hydroxymethyl-5α-cholesta-8-en-3β-ol 14-dehydrogenase
    • 4,4-dimethyl-14α-hydroxymethyl-5α-cholesta-8-en-3β-ol,nadph:oxygen oxidoreductase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY66-3, cholesterol biosynthesis II (via 24,25-dihydrolanosterol):
    • 12 reactions found over 18 reactions in the full pathway

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=MALATE-DEHYDROGENASE-NADP%2B-RXN&oldid=115778"