Difference between revisions of "MALONYL-COA-ACP-TRANSACYL-RXN"
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(Created page with "Category:reaction == Reaction RXN-2562 == * direction: ** left-to-right * common-name: ** δ-tocopherol methyltransferase * ec-number: ** [http://enzyme.expasy.org/EC...") |
(Created page with "Category:reaction == Reaction MALONYL-COA-ACP-TRANSACYL-RXN == * direction: ** left-to-right * common-name: ** fatty acid synthase ** malonyl-coa-acp transacylase * ec-num...") |
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[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction RXN | + | == Reaction MALONYL-COA-ACP-TRANSACYL-RXN == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
* common-name: | * common-name: | ||
− | ** | + | ** fatty acid synthase |
+ | ** malonyl-coa-acp transacylase | ||
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/2.1.1. | + | ** [http://enzyme.expasy.org/EC/2.3.1.86 ec-2.3.1.86] |
+ | ** [http://enzyme.expasy.org/EC/2.3.1.85 ec-2.3.1.85] | ||
+ | ** [http://enzyme.expasy.org/EC/2.3.1.39 ec-2.3.1.39] | ||
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[ACP]][c] '''+''' 1 [[MALONYL-COA]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[MALONYL-ACP]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
+ | * Gene: [[SJ17743]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | * Gene: [[SJ11672]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | * Gene: [[SJ00320]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | * Gene: [[SJ04769]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | * Gene: [[SJ00613]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | * Gene: [[SJ15983]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | * Gene: [[SJ19629]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | * Gene: [[SJ10624]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | * Gene: [[SJ18059]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | * Gene: [[SJ06617]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | * Gene: [[SJ06616]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | * Gene: [[SJ04443]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | * Gene: [[SJ03883]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | * Gene: [[SJ13014]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | * Gene: [[SJ06944]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
− | |||
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | </div> | ||
== Pathway(s) == | == Pathway(s) == | ||
− | * [[PWY- | + | * [[PWY-7388]], octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast): |
− | ** ''' | + | ** '''7''' reactions found over '''11''' reactions in the full pathway |
+ | * [[PWY-4381]], fatty acid biosynthesis initiation (type II): | ||
+ | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY-6799]], fatty acid biosynthesis initiation (plant mitochondria): | ||
+ | ** '''1''' reactions found over '''4''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
− | |||
− | |||
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | * category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
− | * METANETX-RXN : | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
+ | * METANETX-RXN : MNXR101421 | ||
* LIGAND-RXN: | * LIGAND-RXN: | ||
− | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R01626 R01626] |
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/P72391 P72391] | ||
+ | ** [http://www.uniprot.org/uniprot/P49327 P49327] | ||
+ | ** [http://www.uniprot.org/uniprot/O34825 O34825] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9RT24 Q9RT24] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9JW58 Q9JW58] | ||
+ | ** [http://www.uniprot.org/uniprot/P0AAI9 P0AAI9] | ||
+ | ** [http://www.uniprot.org/uniprot/O24916 O24916] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9JXR4 Q9JXR4] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9ZCJ6 Q9ZCJ6] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9YBK5 Q9YBK5] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9PJ11 Q9PJ11] | ||
+ | ** [http://www.uniprot.org/uniprot/P43712 P43712] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9Z8P1 Q9Z8P1] | ||
+ | ** [http://www.uniprot.org/uniprot/O67041 O67041] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9ZMY1 Q9ZMY1] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9PKF6 Q9PKF6] | ||
+ | ** [http://www.uniprot.org/uniprot/P63458 P63458] | ||
+ | ** [http://www.uniprot.org/uniprot/O84241 O84241] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9WZQ5 Q9WZQ5] | ||
+ | ** [http://www.uniprot.org/uniprot/P71019 P71019] | ||
+ | ** [http://www.uniprot.org/uniprot/P07149 P07149] | ||
+ | ** [http://www.uniprot.org/uniprot/P73242 P73242] | ||
+ | ** [http://www.uniprot.org/uniprot/Q8RU07 Q8RU07] | ||
+ | ** [http://www.uniprot.org/uniprot/Q54205 Q54205] | ||
+ | ** [http://www.uniprot.org/uniprot/O54437 O54437] | ||
+ | ** [http://www.uniprot.org/uniprot/Q56692 Q56692] | ||
+ | ** [http://www.uniprot.org/uniprot/O13698 O13698] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9RA34 Q9RA34] | ||
+ | ** [http://www.uniprot.org/uniprot/O69476 O69476] | ||
+ | ** [http://www.uniprot.org/uniprot/P12276 P12276] | ||
+ | ** [http://www.uniprot.org/uniprot/P12785 P12785] | ||
+ | </div> | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
− | {{#set: common-name= | + | {{#set: common-name=fatty acid synthase|malonyl-coa-acp transacylase}} |
− | {{#set: ec-number=ec-2.1.1. | + | {{#set: ec-number=ec-2.3.1.39|ec-2.3.1.85|ec-2.3.1.86}} |
− | {{#set: nb gene associated= | + | {{#set: nb gene associated=15}} |
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=3}} |
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
− | {{#set: reconstruction tool=pantograph | + | {{#set: reconstruction tool=pathwaytools|pantograph}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source= | + | {{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}} |
Latest revision as of 11:24, 18 March 2021
Contents
Reaction MALONYL-COA-ACP-TRANSACYL-RXN
- direction:
- left-to-right
- common-name:
- fatty acid synthase
- malonyl-coa-acp transacylase
- ec-number:
Reaction formula
- 1 ACP[c] + 1 MALONYL-COA[c] => 1 CO-A[c] + 1 MALONYL-ACP[c]
Gene(s) associated with this reaction
- Gene: SJ17743
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ11672
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ00320
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ04769
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ00613
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ15983
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ19629
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ10624
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ18059
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ06617
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ06616
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ04443
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ03883
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ13014
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ06944
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-7388, octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast):
- 7 reactions found over 11 reactions in the full pathway
- PWY-4381, fatty acid biosynthesis initiation (type II):
- 3 reactions found over 3 reactions in the full pathway
- PWY-6799, fatty acid biosynthesis initiation (plant mitochondria):
- 1 reactions found over 4 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
External links