Difference between revisions of "MANNITOL-1-PHOSPHATASE-RXN"

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(Created page with "Category:reaction == Reaction PGLYCDEHYDROG-RXN == * direction: ** reversible * common-name: ** d-3-phosphoglycerate dehydrogenase * ec-number: ** [http://enzyme.expasy.or...")
(Created page with "Category:reaction == Reaction MANNITOL-1-PHOSPHATASE-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/3.1.3.22 ec-3.1.3.22] == Reaction fo...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction PGLYCDEHYDROG-RXN ==
+
== Reaction MANNITOL-1-PHOSPHATASE-RXN ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
−
* common-name:
 
−
** d-3-phosphoglycerate dehydrogenase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.1.1.95 ec-1.1.1.95]
+
** [http://enzyme.expasy.org/EC/3.1.3.22 ec-3.1.3.22]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[G3P]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[3-P-HYDROXYPYRUVATE]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[MANNITOL-1P]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[MANNITOL]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
−
* Gene: [[SJ02143]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ13642]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ13526]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ09109]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[SERSYN-PWY]], L-serine biosynthesis I:
+
* [[PWY-3881]], mannitol biosynthesis:
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6531]], mannitol cycle:
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR107343
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12644 12644]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19538 19538]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01513 R01513]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02167 R02167]
−
* UNIPROT:
+
{{#set: direction=left-to-right}}
−
** [http://www.uniprot.org/uniprot/Q58424 Q58424]
+
{{#set: ec-number=ec-3.1.3.22}}
−
** [http://www.uniprot.org/uniprot/P43885 P43885]
+
{{#set: nb gene associated=0}}
−
** [http://www.uniprot.org/uniprot/P35136 P35136]
+
{{#set: nb pathway associated=2}}
−
** [http://www.uniprot.org/uniprot/Q9PP40 Q9PP40]
+
{{#set: reconstruction category=gap-filling}}
−
** [http://www.uniprot.org/uniprot/P0A9T0 P0A9T0]
+
{{#set: reconstruction tool=meneco}}
−
** [http://www.uniprot.org/uniprot/P40510 P40510]
+
{{#set: reconstruction comment=added for gapfilling}}
−
** [http://www.uniprot.org/uniprot/P40054 P40054]
+
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}
−
** [http://www.uniprot.org/uniprot/O49485 O49485]
 
−
** [http://www.uniprot.org/uniprot/P87228 P87228]
 
−
** [http://www.uniprot.org/uniprot/O04130 O04130]
 
−
{{#set: direction=reversible}}
 
−
{{#set: common-name=d-3-phosphoglycerate dehydrogenase}}
 
−
{{#set: ec-number=ec-1.1.1.95}}
 
−
{{#set: nb gene associated=4}}
 
−
{{#set: nb pathway associated=1}}
 
−
{{#set: reconstruction category=annotation|orthology}}
 
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
−
{{#set: reconstruction comment=n.a}}
 
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
 

Latest revision as of 11:23, 18 March 2021

Reaction MANNITOL-1-PHOSPHATASE-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-3881, mannitol biosynthesis:
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-6531, mannitol cycle:
    • 4 reactions found over 5 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR107343
  • RHEA:
  • LIGAND-RXN:





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