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| Line 1: |
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| | [[Category:reaction]] | | [[Category:reaction]] |
| − | == Reaction 3-OXOACYL-ACP-REDUCT-RXN == | + | == Reaction MANNKIN-RXN-CPD-12601/ATP//MANNOSE-6P/ADP/PROTON.37. == |
| | * direction: | | * direction: |
| | ** left-to-right | | ** left-to-right |
| − | * common-name:
| |
| − | ** fatty acid synthase
| |
| − | ** 3-oxoacyl-[acp] reductase
| |
| − | * ec-number:
| |
| − | ** [http://enzyme.expasy.org/EC/2.3.1.86 ec-2.3.1.86]
| |
| − | ** [http://enzyme.expasy.org/EC/2.3.1.85 ec-2.3.1.85]
| |
| − | ** [http://enzyme.expasy.org/EC/1.1.1.100 ec-1.1.1.100]
| |
| | == Reaction formula == | | == Reaction formula == |
| − | * 1 [[B-KETOACYL-ACP]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[OH-ACYL-ACP]][c] | + | * 1.0 [[ATP]][c] '''+''' 1.0 [[CPD-12601]][c] '''=>''' 1.0 [[ADP]][c] '''+''' 1.0 [[MANNOSE-6P]][c] '''+''' 1.0 [[PROTON]][c] |
| | == Gene(s) associated with this reaction == | | == Gene(s) associated with this reaction == |
| − | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
| |
| − | * Gene: [[SJ04769]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[SJ18059]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[SJ00320]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[SJ17743]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[SJ06616]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[SJ04443]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[SJ19629]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[SJ03883]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[SJ00613]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[SJ06944]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[SJ04229]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | * Gene: [[SJ13014]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | ** Category: [[orthology]]
| |
| − | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
| |
| − | * Gene: [[SJ15983]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[SJ10624]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[SJ06617]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[SJ11672]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | </div>
| |
| | == Pathway(s) == | | == Pathway(s) == |
| − | * [[FASYN-ELONG-PWY]], fatty acid elongation -- saturated:
| |
| − | ** '''5''' reactions found over '''5''' reactions in the full pathway
| |
| | == Reconstruction information == | | == Reconstruction information == |
| − | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | + | * category: [[manual]]; source: [[previous_meneco]]; tool: [[curation]]; comment: reaction added with meneco (previous version) |
| − | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
| |
| | == External links == | | == External links == |
| − | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
| |
| − | * METANETX-RXN : MNXR107713
| |
| − | * RHEA:
| |
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17399 17399]
| |
| − | * LIGAND-RXN:
| |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R02767 R02767]
| |
| − | * UNIPROT:
| |
| − | ** [http://www.uniprot.org/uniprot/P49327 P49327]
| |
| − | ** [http://www.uniprot.org/uniprot/O25286 O25286]
| |
| − | ** [http://www.uniprot.org/uniprot/P51831 P51831]
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| − | ** [http://www.uniprot.org/uniprot/Q9PI70 Q9PI70]
| |
| − | ** [http://www.uniprot.org/uniprot/P0AEK2 P0AEK2]
| |
| − | ** [http://www.uniprot.org/uniprot/Q9ZLS0 Q9ZLS0]
| |
| − | ** [http://www.uniprot.org/uniprot/P43713 P43713]
| |
| − | ** [http://www.uniprot.org/uniprot/P14802 P14802]
| |
| − | ** [http://www.uniprot.org/uniprot/O32229 O32229]
| |
| − | ** [http://www.uniprot.org/uniprot/Q9JW61 Q9JW61]
| |
| − | ** [http://www.uniprot.org/uniprot/O34782 O34782]
| |
| − | ** [http://www.uniprot.org/uniprot/O67610 O67610]
| |
| − | ** [http://www.uniprot.org/uniprot/P27583 P27583]
| |
| − | ** [http://www.uniprot.org/uniprot/P33207 P33207]
| |
| − | ** [http://www.uniprot.org/uniprot/P27582 P27582]
| |
| − | ** [http://www.uniprot.org/uniprot/P28643 P28643]
| |
| − | ** [http://www.uniprot.org/uniprot/P73574 P73574]
| |
| − | ** [http://www.uniprot.org/uniprot/O54438 O54438]
| |
| − | ** [http://www.uniprot.org/uniprot/P55336 P55336]
| |
| − | ** [http://www.uniprot.org/uniprot/Q9RA33 Q9RA33]
| |
| − | ** [http://www.uniprot.org/uniprot/Q44326 Q44326]
| |
| − | ** [http://www.uniprot.org/uniprot/P12276 P12276]
| |
| − | ** [http://www.uniprot.org/uniprot/P12785 P12785]
| |
| − | </div>
| |
| | {{#set: direction=left-to-right}} | | {{#set: direction=left-to-right}} |
| − | {{#set: common-name=3-oxoacyl-[acp] reductase|fatty acid synthase}}
| + | {{#set: nb gene associated=0}} |
| − | {{#set: ec-number=ec-2.3.1.85|ec-2.3.1.86|ec-1.1.1.100}}
| + | {{#set: nb pathway associated=0}} |
| − | {{#set: nb gene associated=16}} | + | {{#set: reconstruction category=manual}} |
| − | {{#set: nb pathway associated=1}} | + | {{#set: reconstruction tool=curation}} |
| − | {{#set: reconstruction category=orthology|annotation}} | + | {{#set: reconstruction comment=reaction added with meneco (previous version)}} |
| − | {{#set: reconstruction tool=pantograph|pathwaytools}} | + | {{#set: reconstruction source=previous_meneco}} |
| − | {{#set: reconstruction comment=n.a}} | |
| − | {{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}} | |
