Difference between revisions of "MANNPISOM-RXN"
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(Created page with "Category:reaction == Reaction RXN-12969 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/4.2.1.134 ec-4.2.1.134] == Reaction formula == * 1 ...") |
(Created page with "Category:reaction == Reaction MANNPISOM-RXN == * direction: ** reversible * common-name: ** mannose-6-phosphate isomerase * ec-number: ** [http://enzyme.expasy.org/EC/5.3....") |
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[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction RXN | + | == Reaction MANNPISOM-RXN == |
* direction: | * direction: | ||
− | ** | + | ** reversible |
+ | * common-name: | ||
+ | ** mannose-6-phosphate isomerase | ||
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/5.3.1.8 ec-5.3.1.8] |
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[CPD- | + | * 1 [[CPD-15979]][c] '''<=>''' 1 [[FRUCTOSE-6P]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
+ | * Gene: [[SJ15069]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
− | * Gene: [[ | + | ** Category: [[orthology]] |
+ | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ01610]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | * Gene: [[SJ22044]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ15067]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | </div> | ||
== Pathway(s) == | == Pathway(s) == | ||
− | * [[PWY- | + | * [[PWY-3861]], mannitol degradation II: |
− | ** '''5''' reactions found over '''5''' reactions in the full pathway | + | ** '''2''' reactions found over '''4''' reactions in the full pathway |
− | * [[PWY- | + | * [[PWY-5659]], GDP-mannose biosynthesis: |
− | ** ''' | + | ** '''3''' reactions found over '''4''' reactions in the full pathway |
+ | * [[PWY-7586]], β-1,4-D-mannosyl-N-acetyl-D-glucosamine degradation: | ||
+ | ** '''2''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY-7456]], β-(1,4)-mannan degradation: | ||
+ | ** '''2''' reactions found over '''7''' reactions in the full pathway | ||
+ | * [[PWY-6992]], 1,5-anhydrofructose degradation: | ||
+ | ** '''4''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-882]], L-ascorbate biosynthesis I (plants, L-galactose pathway): | ||
+ | ** '''6''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-3881]], mannitol biosynthesis: | ||
+ | ** '''2''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[MANNCAT-PWY]], D-mannose degradation I: | ||
+ | ** '''1''' reactions found over '''2''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
− | {{#set: direction= | + | * METANETX-RXN : MNXR101382 |
− | {{#set: ec-number=ec- | + | * RHEA: |
− | {{#set: nb gene associated= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12359 12359] |
− | {{#set: nb pathway associated= | + | * LIGAND-RXN: |
− | {{#set: reconstruction category=annotation}} | + | ** [http://www.genome.jp/dbget-bin/www_bget?R00772 R00772] |
− | {{#set: reconstruction tool=pathwaytools}} | + | * UNIPROT: |
+ | ** [http://www.uniprot.org/uniprot/P07874 P07874] | ||
+ | ** [http://www.uniprot.org/uniprot/P29951 P29951] | ||
+ | ** [http://www.uniprot.org/uniprot/P39841 P39841] | ||
+ | ** [http://www.uniprot.org/uniprot/P00946 P00946] | ||
+ | ** [http://www.uniprot.org/uniprot/P25081 P25081] | ||
+ | ** [http://www.uniprot.org/uniprot/Q52206 Q52206] | ||
+ | ** [http://www.uniprot.org/uniprot/P34949 P34949] | ||
+ | ** [http://www.uniprot.org/uniprot/P29952 P29952] | ||
+ | ** [http://www.uniprot.org/uniprot/P34948 P34948] | ||
+ | ** [http://www.uniprot.org/uniprot/Q55183 Q55183] | ||
+ | ** [http://www.uniprot.org/uniprot/P73377 P73377] | ||
+ | {{#set: direction=reversible}} | ||
+ | {{#set: common-name=mannose-6-phosphate isomerase}} | ||
+ | {{#set: ec-number=ec-5.3.1.8}} | ||
+ | {{#set: nb gene associated=4}} | ||
+ | {{#set: nb pathway associated=8}} | ||
+ | {{#set: reconstruction category=orthology|annotation}} | ||
+ | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source=saccharina_japonica_genome}} | + | {{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome}} |
Latest revision as of 11:22, 18 March 2021
Contents
Reaction MANNPISOM-RXN
- direction:
- reversible
- common-name:
- mannose-6-phosphate isomerase
- ec-number:
Reaction formula
- 1 CPD-15979[c] <=> 1 FRUCTOSE-6P[c]
Gene(s) associated with this reaction
- Gene: SJ15069
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ01610
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ22044
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ15067
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-3861, mannitol degradation II:
- 2 reactions found over 4 reactions in the full pathway
- PWY-5659, GDP-mannose biosynthesis:
- 3 reactions found over 4 reactions in the full pathway
- PWY-7586, β-1,4-D-mannosyl-N-acetyl-D-glucosamine degradation:
- 2 reactions found over 3 reactions in the full pathway
- PWY-7456, β-(1,4)-mannan degradation:
- 2 reactions found over 7 reactions in the full pathway
- PWY-6992, 1,5-anhydrofructose degradation:
- 4 reactions found over 5 reactions in the full pathway
- PWY-882, L-ascorbate biosynthesis I (plants, L-galactose pathway):
- 6 reactions found over 5 reactions in the full pathway
- PWY-3881, mannitol biosynthesis:
- 2 reactions found over 3 reactions in the full pathway
- MANNCAT-PWY, D-mannose degradation I:
- 1 reactions found over 2 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- category: orthology; source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
External links
- METANETX-RXN : MNXR101382
- RHEA:
- LIGAND-RXN:
- UNIPROT: