Difference between revisions of "MERCURY-II-REDUCTASE-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN] == * direction: ** left-...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HOMOACONITATE-HYDRATASE-RXN HOMOACONITATE-HYDRATASE-RXN] == * direction: ** reversible * ec-number:...")
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HOMOACONITATE-HYDRATASE-RXN HOMOACONITATE-HYDRATASE-RXN] ==
 
* direction:
 
* direction:
−
** left-to-right
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** reversible
−
* common-name:
 
−
** diphosphomevalonate decarboxylase
 
 
* ec-number:
 
* ec-number:
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** [http://enzyme.expasy.org/EC/4.1.1.33 ec-4.1.1.33]
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** [http://enzyme.expasy.org/EC/4.2.1.36 ec-4.2.1.36]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[CPD-641]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[DELTA3-ISOPENTENYL-PP]][c] '''+''' 1 [[Pi]][c]
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* 1 [[HOMO-I-CIT]][c] '''<=>''' 1 [[HOMO-CIS-ACONITATE]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ05356]]
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* Gene: [[SJ09771]]
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** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7391]], isoprene biosynthesis II (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7391 PWY-7391]
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* [[LYSINE-AMINOAD-PWY]], L-lysine biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=LYSINE-AMINOAD-PWY LYSINE-AMINOAD-PWY]
−
** '''7''' reactions found over '''8''' reactions in the full pathway
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** '''1''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-922]], mevalonate pathway I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-922 PWY-922]
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* [[P241-PWY]], coenzyme B biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=P241-PWY P241-PWY]
−
** '''7''' reactions found over '''7''' reactions in the full pathway
+
** '''1''' reactions found over '''16''' reactions in the full pathway
 +
* [[PWY-3081]], L-lysine biosynthesis V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3081 PWY-3081]
 +
** '''1''' reactions found over '''10''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23733 23733]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15488 15488]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01121 R01121]
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** [http://www.genome.jp/dbget-bin/www_bget?R04371 R04371]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P32377 P32377]
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** [http://www.uniprot.org/uniprot/Q58409 Q58409]
−
** [http://www.uniprot.org/uniprot/Q9U2A1 Q9U2A1]
+
** [http://www.uniprot.org/uniprot/P49367 P49367]
−
** [http://www.uniprot.org/uniprot/Q9U294 Q9U294]
+
** [http://www.uniprot.org/uniprot/Q9UT74 Q9UT74]
−
** [http://www.uniprot.org/uniprot/O13963 O13963]
+
{{#set: direction=reversible}}
−
** [http://www.uniprot.org/uniprot/Q9M381 Q9M381]
+
{{#set: ec-number=ec-4.2.1.36}}
−
** [http://www.uniprot.org/uniprot/O23722 O23722]
 
−
{{#set: direction=left-to-right}}
 
−
{{#set: common-name=diphosphomevalonate decarboxylase}}
 
−
{{#set: ec-number=ec-4.1.1.33}}
 
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=3}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}

Revision as of 09:31, 27 August 2019

Reaction HOMOACONITATE-HYDRATASE-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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