Difference between revisions of "METHENYLTHFCYCLOHYDRO-RXN"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY4FS-4 PWY4FS-4] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-33090 tax-3...")
(Created page with "Category:reaction == Reaction METHENYLTHFCYCLOHYDRO-RXN == * direction: ** reversible * common-name: ** methenyltetrahydrofolate cyclohydrolase * ec-number: ** [http://enz...")
 
(8 intermediate revisions by 3 users not shown)
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY4FS-4 PWY4FS-4] ==
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== Reaction METHENYLTHFCYCLOHYDRO-RXN ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-33090 tax-33090]
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** reversible
 
* common-name:
 
* common-name:
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** phosphatidylcholine biosynthesis iv
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** methenyltetrahydrofolate cyclohydrolase
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== Reaction(s) found ==
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* ec-number:
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* [[RXN4FS-2]]
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** [http://enzyme.expasy.org/EC/3.5.4.9 ec-3.5.4.9]
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== Reaction(s) not found ==
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== Reaction formula ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN4FS-4 RXN4FS-4]
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* 1 [[5-10-METHENYL-THF-GLU-N]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[FORMYL-THF-GLU-N]][c] '''+''' 1 [[PROTON]][c]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-5642 RXN-5642]
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== Gene(s) associated with this reaction  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=2.1.1.103-RXN 2.1.1.103-RXN]
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* Gene: [[SJ12991]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN4FS-3 RXN4FS-3]
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** Category: [[annotation]]
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{{#set: taxonomic-range=tax-33090}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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{{#set: common-name=phosphatidylcholine biosynthesis iv}}
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* Gene: [[SJ10799]]
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{{#set: nb reaction found=1}}
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** Category: [[annotation]]
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{{#set: completion rate=0.2}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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{{#set: nb total reaction=5}}
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* Gene: [[SJ17385]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ11954]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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== Pathway(s) ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[1CMET2-PWY]], folate transformations III (E. coli):
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** '''8''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-5497]], purine nucleobases degradation II (anaerobic):
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** '''10''' reactions found over '''24''' reactions in the full pathway
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* [[P164-PWY]], purine nucleobases degradation I (anaerobic):
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** '''6''' reactions found over '''15''' reactions in the full pathway
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* [[CODH-PWY]], reductive acetyl coenzyme A pathway I (homoacetogenic bacteria):
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** '''4''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-5030]], L-histidine degradation III:
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** '''3''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-7909]], formaldehyde oxidation VII (THF pathway):
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-3841]], folate transformations II (plants):
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** '''9''' reactions found over '''11''' reactions in the full pathway
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* [[PWY-2201]], folate transformations I:
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** '''9''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-6613]], tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate:
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-1722]], formate assimilation into 5,10-methylenetetrahydrofolate:
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** '''3''' reactions found over '''3''' reactions in the full pathway
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</div>
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== Reconstruction information  ==
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== External links  ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* METANETX-RXN : MNXR116053
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* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23703 23703]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R01655 R01655]
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/P09440 P09440]
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** [http://www.uniprot.org/uniprot/P07245 P07245]
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** [http://www.uniprot.org/uniprot/P11586 P11586]
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** [http://www.uniprot.org/uniprot/P18155 P18155]
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** [http://www.uniprot.org/uniprot/P44313 P44313]
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** [http://www.uniprot.org/uniprot/P47259 P47259]
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** [http://www.uniprot.org/uniprot/P13995 P13995]
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** [http://www.uniprot.org/uniprot/P54382 P54382]
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** [http://www.uniprot.org/uniprot/O67736 O67736]
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** [http://www.uniprot.org/uniprot/Q9JWI9 Q9JWI9]
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** [http://www.uniprot.org/uniprot/Q9PP68 Q9PP68]
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** [http://www.uniprot.org/uniprot/P24186 P24186]
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** [http://www.uniprot.org/uniprot/Q04448 Q04448]
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** [http://www.uniprot.org/uniprot/Q60006 Q60006]
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** [http://www.uniprot.org/uniprot/Q27772 Q27772]
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** [http://www.uniprot.org/uniprot/P51696 P51696]
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** [http://www.uniprot.org/uniprot/O68031 O68031]
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** [http://www.uniprot.org/uniprot/Q9ZTV0 Q9ZTV0]
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** [http://www.uniprot.org/uniprot/Q9X7F6 Q9X7F6]
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</div>
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{{#set: direction=reversible}}
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{{#set: common-name=methenyltetrahydrofolate cyclohydrolase}}
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{{#set: ec-number=ec-3.5.4.9}}
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{{#set: nb gene associated=4}}
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{{#set: nb pathway associated=10}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction tool=pathwaytools|pantograph}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:21, 18 March 2021

Reaction METHENYLTHFCYCLOHYDRO-RXN

  • direction:
    • reversible
  • common-name:
    • methenyltetrahydrofolate cyclohydrolase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • 1CMET2-PWY, folate transformations III (E. coli):
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-5497, purine nucleobases degradation II (anaerobic):
    • 10 reactions found over 24 reactions in the full pathway
  • P164-PWY, purine nucleobases degradation I (anaerobic):
    • 6 reactions found over 15 reactions in the full pathway
  • CODH-PWY, reductive acetyl coenzyme A pathway I (homoacetogenic bacteria):
    • 4 reactions found over 10 reactions in the full pathway
  • PWY-5030, L-histidine degradation III:
    • 3 reactions found over 6 reactions in the full pathway
  • PWY-7909, formaldehyde oxidation VII (THF pathway):
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-3841, folate transformations II (plants):
    • 9 reactions found over 11 reactions in the full pathway
  • PWY-2201, folate transformations I:
    • 9 reactions found over 10 reactions in the full pathway
  • PWY-6613, tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate:
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-1722, formate assimilation into 5,10-methylenetetrahydrofolate:
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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