Difference between revisions of "METHENYLTHFCYCLOHYDRO-RXN"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction DIAMINOPIMDECARB-RXN == * direction: ** left-to-right * common-name: ** diaminopimelate decarboxylase * ec-number: ** [http://enzyme.expasy.o...")
(Created page with "Category:reaction == Reaction TAGAKIN-RXN == * direction: ** left-to-right * common-name: ** tagatose-6-phosphate kinase * ec-number: ** [http://enzyme.expasy.org/EC/2.7.1...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction DIAMINOPIMDECARB-RXN ==
+
== Reaction TAGAKIN-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** diaminopimelate decarboxylase
+
** tagatose-6-phosphate kinase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.1.1.20 ec-4.1.1.20]
+
** [http://enzyme.expasy.org/EC/2.7.1.144 ec-2.7.1.144]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[MESO-DIAMINOPIMELATE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[LYS]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[TAGATOSE-6-PHOSPHATE]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[TAGATOSE-1-6-DIPHOSPHATE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ09103]]
+
* Gene: [[SJ03418]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ00674]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ21359]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-2942]], L-lysine biosynthesis III:
+
* [[GALACTITOLCAT-PWY]], galactitol degradation:
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
** '''2''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-5097]], L-lysine biosynthesis VI:
+
* [[PWY-7395]], D-galactosamine and N-acetyl-D-galactosamine degradation:
−
** '''7''' reactions found over '''7''' reactions in the full pathway
+
** '''2''' reactions found over '''4''' reactions in the full pathway
−
* [[DAPLYSINESYN-PWY]], L-lysine biosynthesis I:
+
* [[PWY-7077]], N-acetyl-D-galactosamine degradation:
−
** '''7''' reactions found over '''9''' reactions in the full pathway
+
** '''2''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-2941]], L-lysine biosynthesis II:
+
* [[LACTOSECAT-PWY]], lactose and galactose degradation I:
−
** '''6''' reactions found over '''9''' reactions in the full pathway
+
** '''2''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15102 15102]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12421 12421]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00451 R00451]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03236 R03236]
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P19572 P19572]
 
−
** [http://www.uniprot.org/uniprot/P0A5M4 P0A5M4]
 
−
** [http://www.uniprot.org/uniprot/P44316 P44316]
 
−
** [http://www.uniprot.org/uniprot/P56129 P56129]
 
−
** [http://www.uniprot.org/uniprot/O67262 O67262]
 
−
** [http://www.uniprot.org/uniprot/Q9JWA6 Q9JWA6]
 
−
** [http://www.uniprot.org/uniprot/Q9CG26 Q9CG26]
 
−
** [http://www.uniprot.org/uniprot/P00861 P00861]
 
−
** [http://www.uniprot.org/uniprot/O27390 O27390]
 
−
** [http://www.uniprot.org/uniprot/Q9PII5 Q9PII5]
 
−
** [http://www.uniprot.org/uniprot/Q58497 Q58497]
 
−
** [http://www.uniprot.org/uniprot/O29458 O29458]
 
−
** [http://www.uniprot.org/uniprot/P41023 P41023]
 
−
** [http://www.uniprot.org/uniprot/P23630 P23630]
 
−
** [http://www.uniprot.org/uniprot/P09890 P09890]
 
−
** [http://www.uniprot.org/uniprot/Q55484 Q55484]
 
−
** [http://www.uniprot.org/uniprot/O05321 O05321]
 
−
</div>
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=diaminopimelate decarboxylase}}
+
{{#set: common-name=tagatose-6-phosphate kinase}}
−
{{#set: ec-number=ec-4.1.1.20}}
+
{{#set: ec-number=ec-2.7.1.144}}
−
{{#set: nb gene associated=3}}
+
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=4}}
 
{{#set: nb pathway associated=4}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 13:16, 14 January 2021

Reaction TAGAKIN-RXN

  • direction:
    • left-to-right
  • common-name:
    • tagatose-6-phosphate kinase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • GALACTITOLCAT-PWY, galactitol degradation:
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-7395, D-galactosamine and N-acetyl-D-galactosamine degradation:
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-7077, N-acetyl-D-galactosamine degradation:
    • 2 reactions found over 5 reactions in the full pathway
  • LACTOSECAT-PWY, lactose and galactose degradation I:
    • 2 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=METHENYLTHFCYCLOHYDRO-RXN&oldid=89494"