Difference between revisions of "METHYLCROTONYL-COA-CARBOXYLASE-RXN"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7579 PWY-7579] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-1117 tax-11...")
(Created page with "Category:reaction == Reaction METHYLCROTONYL-COA-CARBOXYLASE-RXN == * direction: ** left-to-right * common-name: ** 3-methylcrotonyl-coa carboxylase * ec-number: ** [http:...")
 
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7579 PWY-7579] ==
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== Reaction METHYLCROTONYL-COA-CARBOXYLASE-RXN ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-1117 tax-1117]
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** left-to-right
 
* common-name:
 
* common-name:
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** phycourobilin biosynthesis
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** 3-methylcrotonyl-coa carboxylase
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== Reaction(s) found ==
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* ec-number:
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* [[1.3.7.2-RXN]]
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** [http://enzyme.expasy.org/EC/6.4.1.4 ec-6.4.1.4]
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* [[1.3.7.3-RXN]]
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== Reaction formula ==
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* [[RXN-17523]]
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* 1 [[3-METHYL-CROTONYL-COA]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[HCO3]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[TRANS-3-METHYL-GLUTACONYL-COA]][c]
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== Reaction(s) not found ==
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== Gene(s) associated with this reaction  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15990 RXN-15990]
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* Gene: [[SJ12008]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15985 RXN-15985]
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** Category: [[annotation]]
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{{#set: taxonomic-range=tax-1117}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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{{#set: common-name=phycourobilin biosynthesis}}
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** Category: [[orthology]]
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{{#set: nb reaction found=3}}
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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{{#set: completion rate=0.6}}
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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{{#set: nb total reaction=5}}
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* Gene: [[SJ08104]]
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** Category: [[orthology]]
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ19835]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[SJ02214]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** Category: [[orthology]]
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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== Pathway(s) ==
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* [[LEU-DEG2-PWY]], L-leucine degradation I:
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** '''4''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== External links  ==
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* METANETX-RXN : MNXR101411
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* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13590 13590]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R04138 R04138]
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/Q40121 Q40121]
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** [http://www.uniprot.org/uniprot/Q42777 Q42777]
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{{#set: direction=left-to-right}}
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{{#set: common-name=3-methylcrotonyl-coa carboxylase}}
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{{#set: ec-number=ec-6.4.1.4}}
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{{#set: nb gene associated=4}}
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{{#set: nb pathway associated=1}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction tool=pathwaytools|pantograph}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome}}

Latest revision as of 11:24, 18 March 2021

Reaction METHYLCROTONYL-COA-CARBOXYLASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • 3-methylcrotonyl-coa carboxylase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • LEU-DEG2-PWY, L-leucine degradation I:
    • 4 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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