Difference between revisions of "METHYLCROTONYL-COA-CARBOXYLASE-RXN"

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(Created page with "Category:reaction == Reaction BIOTIN-CARBOXYL-RXN == * direction: ** left-to-right * common-name: ** biotin carboxylase * ec-number: ** [http://enzyme.expasy.org/EC/6.3.4....")
(Created page with "Category:reaction == Reaction PGMTh == * direction: ** reversible * common-name: ** phosphoglucomutase, chloroplast == Reaction formula == * 1.0 GLC-1-P[h] '''<=>''' 1...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction BIOTIN-CARBOXYL-RXN ==
+
== Reaction PGMTh ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** biotin carboxylase
+
** phosphoglucomutase, chloroplast
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/6.3.4.14 ec-6.3.4.14]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[HCO3]][c] '''+''' 1 [[biotin-L-lysine-in-BCCP-dimers]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[carboxybiotin-L-lysine-in-BCCP-dimers]][c]
+
* 1.0 [[GLC-1-P]][h] '''<=>''' 1.0 [[ALPHA-GLC-6-P]][h]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* Gene: [[SJ12510]]
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* Gene: [[SJ14528]]
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** Category: [[orthology]]
−
** Category: [[annotation]]
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
* Gene: [[SJ18341]]
−
* Gene: [[SJ12870]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ02214]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ12670]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ17987]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ00485]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ14529]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ06726]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5744]], glyoxylate assimilation:
 
−
** '''4''' reactions found over '''13''' reactions in the full pathway
 
−
* [[PWY-5743]], 3-hydroxypropanoate cycle:
 
−
** '''5''' reactions found over '''13''' reactions in the full pathway
 
−
* [[PWY-5789]], 3-hydroxypropanoate/4-hydroxybutanate cycle:
 
−
** '''8''' reactions found over '''18''' reactions in the full pathway
 
−
* [[PWY0-1264]], biotin-carboxyl carrier protein assembly:
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
{{#set: direction=reversible}}
−
* RHEA:
+
{{#set: common-name=phosphoglucomutase, chloroplast}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13502 13502]
+
{{#set: nb gene associated=2}}
−
* LIGAND-RXN:
+
{{#set: nb pathway associated=0}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R04385 R04385]
+
{{#set: reconstruction category=orthology}}
−
* UNIPROT:
+
{{#set: reconstruction tool=pantograph}}
−
** [http://www.uniprot.org/uniprot/Q06862 Q06862]
 
−
** [http://www.uniprot.org/uniprot/O67483 O67483]
 
−
** [http://www.uniprot.org/uniprot/Q9CHF3 Q9CHF3]
 
−
** [http://www.uniprot.org/uniprot/Q58626 Q58626]
 
−
** [http://www.uniprot.org/uniprot/P43873 P43873]
 
−
** [http://www.uniprot.org/uniprot/Q9PN09 Q9PN09]
 
−
** [http://www.uniprot.org/uniprot/Q9JW07 Q9JW07]
 
−
** [http://www.uniprot.org/uniprot/P24182 P24182]
 
−
** [http://www.uniprot.org/uniprot/O04983 O04983]
 
−
** [http://www.uniprot.org/uniprot/O81273 O81273]
 
−
** [http://www.uniprot.org/uniprot/Q42777 Q42777]
 
−
** [http://www.uniprot.org/uniprot/Q39825 Q39825]
 
−
** [http://www.uniprot.org/uniprot/O23960 O23960]
 
−
** [http://www.uniprot.org/uniprot/O52602 O52602]
 
−
** [http://www.uniprot.org/uniprot/Q9R9I4 Q9R9I4]
 
−
</div>
 
−
{{#set: direction=left-to-right}}
 
−
{{#set: common-name=biotin carboxylase}}
 
−
{{#set: ec-number=ec-6.3.4.14}}
 
−
{{#set: nb gene associated=8}}
 
−
{{#set: nb pathway associated=4}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}

Revision as of 13:19, 14 January 2021

Reaction PGMTh

  • direction:
    • reversible
  • common-name:
    • phosphoglucomutase, chloroplast

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

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