Difference between revisions of "METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.23.5-RXN 3.4.23.5-RXN] == * direction: ** left-to-right * common-name: ** cathepsin d * ec-numb...")
(Created page with "Category:reaction == Reaction METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN == * direction: ** left-to-right * common-name: ** 5'-methylthioadenosine nucleosidase * ec-number: ** [...")
 
(7 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.23.5-RXN 3.4.23.5-RXN] ==
+
== Reaction METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** cathepsin d
+
** 5'-methylthioadenosine nucleosidase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.4.23.5 ec-3.4.23.5]
+
** [http://enzyme.expasy.org/EC/3.2.2.16 ec-3.2.2.16]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[General-Protein-Substrates]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Peptides-holder]][c]
+
* 1 [[5-METHYLTHIOADENOSINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ADENINE]][c] '''+''' 1 [[CPD-560]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ16973]]
+
* Gene: [[SJ14933]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ00305]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
* Gene: [[SJ02916]]
−
* Gene: [[SJ16977]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-6754]], S-methyl-5'-thioadenosine degradation I:
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY0-1391]], S-methyl-5'-thioadenosine degradation IV:
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* UNIPROT:
+
* METANETX-RXN : MNXR101744
−
** [http://www.uniprot.org/uniprot/Q9BGU5 Q9BGU5]
+
* RHEA:
−
** [http://www.uniprot.org/uniprot/Q05744 Q05744]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13618 13618]
−
** [http://www.uniprot.org/uniprot/P07339 P07339]
+
* LIGAND-RXN:
−
** [http://www.uniprot.org/uniprot/P18242 P18242]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01401 R01401]
−
** [http://www.uniprot.org/uniprot/P24268 P24268]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=cathepsin d}}
+
{{#set: common-name=5'-methylthioadenosine nucleosidase}}
−
{{#set: ec-number=ec-3.4.23.5}}
+
{{#set: ec-number=ec-3.2.2.16}}
−
{{#set: nb gene associated=3}}
+
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=2}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}

Latest revision as of 11:20, 18 March 2021

Reaction METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • 5'-methylthioadenosine nucleosidase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6754, S-methyl-5'-thioadenosine degradation I:
    • 1 reactions found over 2 reactions in the full pathway
  • PWY0-1391, S-methyl-5'-thioadenosine degradation IV:
    • 1 reactions found over 1 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR101744
  • RHEA:
  • LIGAND-RXN:





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