Difference between revisions of "METOH"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene SJ20586 == * transcription-direction: ** positive * right-end-position: ** 73785 * left-end-position: ** 37183 * centisome-position: ** 18.080984...")
(Created page with "Category:gene == Gene SJ07466 == * transcription-direction: ** negative * right-end-position: ** 447555 * left-end-position: ** 443235 * centisome-position: ** 97.33535...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ20586 ==
+
== Gene SJ07466 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 73785
+
** 447555
 
* left-end-position:
 
* left-end-position:
−
** 37183
+
** 443235
 
* centisome-position:
 
* centisome-position:
−
** 18.080984    
+
** 97.33535    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[3.1.6.14-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
** Category: [[annotation]]
+
* [[ADENOSYLHOMOCYSTEINASE-RXN]]
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[ARYLSULFAT-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[ADENOSYLHOMOCYSTEINE-NUCLEOSIDASE-RXN]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-11570]]
+
* [[CYSTEINE-AMINOTRANSFERASE-RXN]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
{{#set: transcription-direction=positive}}
+
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
{{#set: right-end-position=73785}}
+
* [[PHEAMINOTRANS-RXN]]
−
{{#set: left-end-position=37183}}
+
** Category: [[orthology]]
−
{{#set: centisome-position=18.080984   }}
+
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[TYROSINE-AMINOTRANSFERASE-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
</div>
 +
== Pathway(s) associated ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[METHIONINE-DEG1-PWY]]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-5041]]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6153]]
 +
** '''1''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6154]]
 +
** '''1''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-6151]]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-I9]]
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY0-1534]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-5329]]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[ANAPHENOXI-PWY]]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PHESYN]]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7432]]
 +
** '''3''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-5079]]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-3581]]
 +
** '''6''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY3O-4108]]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-5048]]
 +
** '''1''' reactions found over '''10''' reactions in the full pathway
 +
* [[TYRFUMCAT-PWY]]
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7514]]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-5886]]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[PWY-7518]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[TYRSYN]]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-5754]]
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-5151]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
</div>
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=447555}}
 +
{{#set: left-end-position=443235}}
 +
{{#set: centisome-position=97.33535   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=3}}
+
{{#set: nb reaction associated=5}}
 +
{{#set: nb pathway associated=22}}

Revision as of 09:27, 27 August 2019

Gene SJ07466

  • transcription-direction:
    • negative
  • right-end-position:
    • 447555
  • left-end-position:
    • 443235
  • centisome-position:
    • 97.33535

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • METHIONINE-DEG1-PWY
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-5041
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-6153
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-6154
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-6151
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-I9
    • 4 reactions found over 5 reactions in the full pathway
  • PWY0-1534
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-5329
    • 2 reactions found over 2 reactions in the full pathway
  • ANAPHENOXI-PWY
    • 1 reactions found over 3 reactions in the full pathway
  • PHESYN
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-7432
    • 3 reactions found over 2 reactions in the full pathway
  • PWY-5079
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-3581
    • 6 reactions found over 11 reactions in the full pathway
  • PWY3O-4108
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-5048
    • 1 reactions found over 10 reactions in the full pathway
  • TYRFUMCAT-PWY
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-7514
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-5886
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-7518
    • 1 reactions found over 2 reactions in the full pathway
  • TYRSYN
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-5754
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-5151
    • 1 reactions found over 2 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=METOH&oldid=32663"