Difference between revisions of "MN+2"

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(Created page with "Category:gene == Gene SJ15619 == * transcription-direction: ** negative * right-end-position: ** 163019 * left-end-position: ** 114589 * centisome-position: ** 39.046772...")
(Created page with "Category:metabolite == Metabolite CPD0-2123 == * common-name: ** 3-oxodecanoyl-coa * smiles: ** cccccccc(=o)cc(=o)sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-]...")
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[[Category:gene]]
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[[Category:metabolite]]
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== Gene SJ15619 ==
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== Metabolite CPD0-2123 ==
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* transcription-direction:
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* common-name:
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** negative
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** 3-oxodecanoyl-coa
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* right-end-position:
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* smiles:
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** 163019
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** cccccccc(=o)cc(=o)sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-]
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* left-end-position:
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* inchi-key:
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** 114589
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** azcvxmaplhsiky-hsjnekgzsa-j
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* centisome-position:
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* molecular-weight:
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** 39.046772   
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** 931.738
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to consume the compound ==
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* [[S.japonica_carotenoid_curated]]
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* [[ACACT4]]
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== Reaction(s) associated ==
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* [[HACD4h]]
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[RXN-13617]]
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* [[3.1.26.3-RXN]]
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== Reaction(s) known to produce the compound ==
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** Category: [[annotation]]
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* [[ACACT4]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[ACACT4h]]
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** Category: [[orthology]]
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* [[HACD4h]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-12490]]
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* [[ATPASE-RXN]]
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== Reaction(s) of unknown directionality ==
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** Category: [[annotation]]
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{{#set: common-name=3-oxodecanoyl-coa}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: inchi-key=inchikey=azcvxmaplhsiky-hsjnekgzsa-j}}
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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{{#set: molecular-weight=931.738}}
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-12195]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-12196]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN0-5462]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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</div>
 
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== Pathway(s) associated ==
 
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* [[PWY-7210]]
 
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** '''8''' reactions found over '''8''' reactions in the full pathway
 
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* [[PWY-7198]]
 
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** '''6''' reactions found over '''7''' reactions in the full pathway
 
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* [[PWY-7184]]
 
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** '''9''' reactions found over '''9''' reactions in the full pathway
 
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* [[PWY-6545]]
 
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** '''8''' reactions found over '''9''' reactions in the full pathway
 
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{{#set: transcription-direction=negative}}
 
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{{#set: right-end-position=163019}}
 
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{{#set: left-end-position=114589}}
 
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{{#set: centisome-position=39.046772    }}
 
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{{#set: organism associated=S.japonica_carotenoid_curated}}
 
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{{#set: nb reaction associated=6}}
 
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{{#set: nb pathway associated=4}}
 

Revision as of 20:34, 18 December 2020

Metabolite CPD0-2123

  • common-name:
    • 3-oxodecanoyl-coa
  • smiles:
    • cccccccc(=o)cc(=o)sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-]
  • inchi-key:
    • azcvxmaplhsiky-hsjnekgzsa-j
  • molecular-weight:
    • 931.738

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

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