Difference between revisions of "MRNA-Fragments"

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(Created page with "Category:gene == Gene SJ07399 == * transcription-direction: ** negative * right-end-position: ** 44013 * left-end-position: ** 34598 * centisome-position: ** 50.848007...")
(Created page with "Category:metabolite == Metabolite CPDMETA-13651 == * common-name: ** perakine * smiles: ** cc3(n5(c2(c1(=nc6(=cc=cc=c(c41(c(c(c(c2)c(c=o)3)c(c4)5)oc(=o)c))6))))) * inchi-k...")
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[[Category:gene]]
+
[[Category:metabolite]]
== Gene SJ07399 ==
+
== Metabolite CPDMETA-13651 ==
* transcription-direction:
+
* common-name:
** negative
+
** perakine
* right-end-position:
+
* smiles:
** 44013
+
** cc3(n5(c2(c1(=nc6(=cc=cc=c(c41(c(c(c(c2)c(c=o)3)c(c4)5)oc(=o)c))6)))))
* left-end-position:
+
* inchi-key:
** 34598
+
** gdxjmogwonjrhl-vqhwpedhsa-n
* centisome-position:
+
* molecular-weight:
** 50.848007   
+
** 350.416
== Organism(s) associated with this gene  ==
+
== Reaction(s) known to consume the compound ==
* [[S.japonica_carotenoid_curated]]
+
* [[RXN-12673]]
== Reaction(s) associated ==
+
== Reaction(s) known to produce the compound ==
* [[2.4.1.223-RXN]]
+
== Reaction(s) of unknown directionality ==
** Category: [[annotation]]
+
{{#set: common-name=perakine}}
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: inchi-key=inchikey=gdxjmogwonjrhl-vqhwpedhsa-n}}
* [[2.4.2.26-RXN]]
+
{{#set: molecular-weight=350.416}}
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
* [[PWY-6558]]
 
** '''7''' reactions found over '''13''' reactions in the full pathway
 
* [[PWY-6557]]
 
** '''2''' reactions found over '''4''' reactions in the full pathway
 
{{#set: transcription-direction=negative}}
 
{{#set: right-end-position=44013}}
 
{{#set: left-end-position=34598}}
 
{{#set: centisome-position=50.848007    }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=2}}
 
{{#set: nb pathway associated=2}}
 

Revision as of 20:32, 18 December 2020

Metabolite CPDMETA-13651

  • common-name:
    • perakine
  • smiles:
    • cc3(n5(c2(c1(=nc6(=cc=cc=c(c41(c(c(c(c2)c(c=o)3)c(c4)5)oc(=o)c))6)))))
  • inchi-key:
    • gdxjmogwonjrhl-vqhwpedhsa-n
  • molecular-weight:
    • 350.416

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality