Difference between revisions of "MRNA-GUANINE-N7--METHYLTRANSFERASE-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=LACCASE-RXN LACCASE-RXN] == * direction: ** left-to-right * common-name: ** hydroquinone:oxygen oxi...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5330 RXN0-5330] == * direction: ** left-to-right * common-name: ** nadh:ubiquinone oxidoreduct...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=LACCASE-RXN LACCASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5330 RXN0-5330] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** hydroquinone:oxygen oxidoreductase
+
** nadh:ubiquinone oxidoreductase
 +
** nadh dehydrogenase (ubiquinone)
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.10.3.2 ec-1.10.3.2]
+
** [http://enzyme.expasy.org/EC/1.6.5.9 ec-1.6.5.9]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 4 [[Benzenediols]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 4 [[Benzosemiquinones]][c] '''+''' 2 [[WATER]][c]
+
* 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Ubiquinones]][c] '''=>''' 1 [[NAD]][c] '''+''' 1 [[Ubiquinols]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ20486]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ21895]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ15450]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ22333]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ19412]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ15310]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ10422]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ02471]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ03600]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ21333]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ14995]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ05715]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ09960]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ16410]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ21017]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-7279]], aerobic respiration II (cytochrome c) (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7279 PWY-7279]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY0-1573]], nitrate reduction VIIIb (dissimilatory): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1573 PWY0-1573]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-7269]], NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7269 PWY-7269]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY0-1568]], NADH to cytochrome bd oxidase electron transfer II: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1568 PWY0-1568]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY0-1567]], NADH to cytochrome bo oxidase electron transfer II: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1567 PWY0-1567]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11277 11277]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23153 23153]
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00083 R00083]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q02497 Q02497]
 
−
** [http://www.uniprot.org/uniprot/Q9UQZ7 Q9UQZ7]
 
−
** [http://www.uniprot.org/uniprot/P93366 P93366]
 
−
** [http://www.uniprot.org/uniprot/Q99055 Q99055]
 
−
** [http://www.uniprot.org/uniprot/Q99056 Q99056]
 
−
** [http://www.uniprot.org/uniprot/P06811 P06811]
 
−
** [http://www.uniprot.org/uniprot/P10574 P10574]
 
−
** [http://www.uniprot.org/uniprot/Q01679 Q01679]
 
−
** [http://www.uniprot.org/uniprot/Q12729 Q12729]
 
−
** [http://www.uniprot.org/uniprot/Q12719 Q12719]
 
−
** [http://www.uniprot.org/uniprot/Q12739 Q12739]
 
−
** [http://www.uniprot.org/uniprot/P56193 P56193]
 
−
** [http://www.uniprot.org/uniprot/Q02079 Q02079]
 
−
** [http://www.uniprot.org/uniprot/Q02081 Q02081]
 
−
** [http://www.uniprot.org/uniprot/P78722 P78722]
 
−
** [http://www.uniprot.org/uniprot/O80434 O80434]
 
−
** [http://www.uniprot.org/uniprot/O81081 O81081]
 
−
** [http://www.uniprot.org/uniprot/O49232 O49232]
 
−
** [http://www.uniprot.org/uniprot/P93367 P93367]
 
−
** [http://www.uniprot.org/uniprot/P93368 P93368]
 
−
</div>
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=hydroquinone:oxygen oxidoreductase}}
+
{{#set: common-name=nadh:ubiquinone oxidoreductase|nadh dehydrogenase (ubiquinone)}}
−
{{#set: ec-number=ec-1.10.3.2}}
+
{{#set: ec-number=ec-1.6.5.9}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=14}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=5}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Revision as of 09:32, 27 August 2019

Reaction RXN0-5330

  • direction:
    • left-to-right
  • common-name:
    • nadh:ubiquinone oxidoreductase
    • nadh dehydrogenase (ubiquinone)
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7279, aerobic respiration II (cytochrome c) (yeast): PWY-7279
    • 4 reactions found over 4 reactions in the full pathway
  • PWY0-1573, nitrate reduction VIIIb (dissimilatory): PWY0-1573
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7269, NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast): PWY-7269
    • 5 reactions found over 5 reactions in the full pathway
  • PWY0-1568, NADH to cytochrome bd oxidase electron transfer II: PWY0-1568
    • 1 reactions found over 2 reactions in the full pathway
  • PWY0-1567, NADH to cytochrome bo oxidase electron transfer II: PWY0-1567
    • 1 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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