Difference between revisions of "Mannosyl5-N-acetyl-glucosamine2-R"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13449 RXN-13449] == * direction: ** left-to-right * common-name: ** short-chain acyl-coa dehydr...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10841 RXN-10841] == * direction: ** reversible * common-name: ** all-trans-retinol dehydrogenas...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13449 RXN-13449] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10841 RXN-10841] ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** short-chain acyl-coa dehydrogenase
+
** all-trans-retinol dehydrogenase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.3.8.1 ec-1.3.8.1]
+
** [http://enzyme.expasy.org/EC/1.1.1.300 ec-1.1.1.300]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ETF-Oxidized]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Short-Chain-234-Saturated-acyl-CoAs]][c] '''=>''' 1 [[ETF-Reduced]][c] '''+''' 1 [[Short-Chain-Trans-23-Dehydroacyl-CoA]][c]
+
* 1 [[CPD-13524]][c] '''+''' 1 [[NADP]][c] '''<=>''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[RETINAL]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ19669]]
+
* Gene: [[SJ13034]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ12574]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ19151]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ02723]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-6857]], retinol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6857 PWY-6857]
 +
** '''3''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6861]], the visual cycle I (vertebrates): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6861 PWY-6861]
 +
** '''1''' reactions found over '''12''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=47197 47197]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25036 25036]
−
{{#set: direction=left-to-right}}
+
* LIGAND-RXN:
−
{{#set: common-name=short-chain acyl-coa dehydrogenase}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R08379 R08379]
−
{{#set: ec-number=ec-1.3.8.1}}
+
{{#set: direction=reversible}}
−
{{#set: nb gene associated=1}}
+
{{#set: common-name=all-trans-retinol dehydrogenase}}
−
{{#set: nb pathway associated=0}}
+
{{#set: ec-number=ec-1.1.1.300}}
 +
{{#set: nb gene associated=4}}
 +
{{#set: nb pathway associated=2}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 09:29, 27 August 2019

Reaction RXN-10841

  • direction:
    • reversible
  • common-name:
    • all-trans-retinol dehydrogenase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6857, retinol biosynthesis: PWY-6857
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-6861, the visual cycle I (vertebrates): PWY-6861
    • 1 reactions found over 12 reactions in the full pathway

Reconstruction information

External links





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