Difference between revisions of "N-ACETYL-D-GLUCOSAMINE-1-P"

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(Created page with "Category:gene == Gene SJ04223 == * transcription-direction: ** negative * right-end-position: ** 108409 * left-end-position: ** 101345 * centisome-position: ** 92.71932...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSMANMUT-RXN PHOSMANMUT-RXN] == * direction: ** reversible * common-name: ** phosphomannomutase *...")
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[[Category:gene]]
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[[Category:reaction]]
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== Gene SJ04223 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSMANMUT-RXN PHOSMANMUT-RXN] ==
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* transcription-direction:
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* direction:
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** negative
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** reversible
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* right-end-position:
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* common-name:
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** 108409
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** phosphomannomutase
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* left-end-position:
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* ec-number:
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** 101345
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** [http://enzyme.expasy.org/EC/5.4.2.8 ec-5.4.2.8]
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* centisome-position:
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== Reaction formula ==
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** 92.71932   
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* 1 [[MANNOSE-1P]][c] '''<=>''' 1 [[CPD-15979]][c]
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== Organism(s) associated with this gene  ==
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== Gene(s) associated with this reaction  ==
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* [[S.japonica_carotenoid_curated]]
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* Gene: [[SJ02279]]
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== Reaction(s) associated ==
 
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
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* [[3.1.1.64-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [[CARBOXYLESTERASE-RXN]]
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** Category: [[orthology]]
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ14545]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [[RETINYL-PALMITATE-ESTERASE-RXN]]
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** Category: [[orthology]]
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** Category: [[annotation]]
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* [[RXN-10711]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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** Category: [[annotation]]
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== Pathway(s)  ==
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[PWY-5659]], GDP-mannose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5659 PWY-5659]
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* [[RXN-10767]]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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** Category: [[annotation]]
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* [[PWY-7456]], &beta;-(1,4)-mannan degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7456 PWY-7456]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** '''2''' reactions found over '''7''' reactions in the full pathway
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* [[RXN-12252]]
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* [[PWY-7586]], &beta;-1,4-D-mannosyl-N-acetyl-D-glucosamine degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7586 PWY-7586]
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** Category: [[annotation]]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[PWY-882]], L-ascorbate biosynthesis I (L-galactose pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-882 PWY-882]
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* [[RXN-12575]]
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** '''6''' reactions found over '''8''' reactions in the full pathway
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** Category: [[annotation]]
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== Reconstruction information  ==
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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* [[RXNQT-4366]]
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* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
** Category: [[annotation]]
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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</div>
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== External links  ==
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== Pathway(s) associated ==
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* RHEA:
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* [[PWY-6303]]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11143 11143]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* LIGAND-RXN:
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* [[PWY-6857]]
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** [http://www.genome.jp/dbget-bin/www_bget?R01818 R01818]
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** '''3''' reactions found over '''7''' reactions in the full pathway
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* UNIPROT:
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{{#set: transcription-direction=negative}}
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** [http://www.uniprot.org/uniprot/P26276 P26276]
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{{#set: right-end-position=108409}}
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** [http://www.uniprot.org/uniprot/P29955 P29955]
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{{#set: left-end-position=101345}}
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** [http://www.uniprot.org/uniprot/P24175 P24175]
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{{#set: centisome-position=92.71932    }}
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** [http://www.uniprot.org/uniprot/P07283 P07283]
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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** [http://www.uniprot.org/uniprot/P47723 P47723]
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{{#set: nb reaction associated=8}}
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** [http://www.uniprot.org/uniprot/Q57842 Q57842]
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{{#set: nb pathway associated=2}}
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** [http://www.uniprot.org/uniprot/P47299 P47299]
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** [http://www.uniprot.org/uniprot/Q59428 Q59428]
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** [http://www.uniprot.org/uniprot/Q06951 Q06951]
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** [http://www.uniprot.org/uniprot/Q49913 Q49913]
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** [http://www.uniprot.org/uniprot/P75050 P75050]
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** [http://www.uniprot.org/uniprot/Q51847 Q51847]
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{{#set: direction=reversible}}
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{{#set: common-name=phosphomannomutase}}
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{{#set: ec-number=ec-5.4.2.8}}
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{{#set: nb gene associated=2}}
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{{#set: nb pathway associated=4}}
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{{#set: reconstruction category=annotation|orthology}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_nannochloropsis_salina}}

Revision as of 09:28, 27 August 2019

Reaction PHOSMANMUT-RXN

  • direction:
    • reversible
  • common-name:
    • phosphomannomutase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5659, GDP-mannose biosynthesis: PWY-5659
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-7456, β-(1,4)-mannan degradation: PWY-7456
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-7586, β-1,4-D-mannosyl-N-acetyl-D-glucosamine degradation: PWY-7586
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-882, L-ascorbate biosynthesis I (L-galactose pathway): PWY-882
    • 6 reactions found over 8 reactions in the full pathway

Reconstruction information

External links





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