Difference between revisions of "N-SUCCINYLLL-2-6-DIAMINOPIMELATE"

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(Created page with "Category:gene == Gene SJ00403 == * transcription-direction: ** positive * right-end-position: ** 466328 * left-end-position: ** 459419 * centisome-position: ** 80.90328...")
(Created page with "Category:metabolite == Metabolite N-SUCCINYLLL-2-6-DIAMINOPIMELATE == * common-name: ** n-succinyl-l,l-2,6-diaminopimelate * smiles: ** c(cc([n+])c(=o)[o-])cc(nc(ccc([o-])...")
 
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[[Category:gene]]
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[[Category:metabolite]]
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== Gene SJ00403 ==
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== Metabolite N-SUCCINYLLL-2-6-DIAMINOPIMELATE ==
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* transcription-direction:
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* common-name:
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** positive
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** n-succinyl-l,l-2,6-diaminopimelate
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* right-end-position:
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* smiles:
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** 466328
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** c(cc([n+])c(=o)[o-])cc(nc(ccc([o-])=o)=o)c([o-])=o
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* left-end-position:
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* inchi-key:
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** 459419
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** glxuwzbupatpbr-bqbzgakwsa-l
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* centisome-position:
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* molecular-weight:
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** 80.90328   
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** 288.257
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to consume the compound ==
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* [[S.japonica_carotenoid_curated]]
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* [[SUCCINYLDIAMINOPIMTRANS-RXN]]
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== Reaction(s) associated ==
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== Reaction(s) known to produce the compound ==
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* [[RXN-15556]]
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* [[SUCCINYLDIAMINOPIMTRANS-RXN]]
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** Category: [[annotation]]
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== Reaction(s) of unknown directionality ==
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: common-name=n-succinyl-l,l-2,6-diaminopimelate}}
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** Category: [[orthology]]
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{{#set: inchi-key=inchikey=glxuwzbupatpbr-bqbzgakwsa-l}}
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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{{#set: molecular-weight=288.257}}
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* [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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== Pathway(s) associated ==
 
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* [[PWY-7511]]
 
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** '''7''' reactions found over '''9''' reactions in the full pathway
 
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{{#set: transcription-direction=positive}}
 
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{{#set: right-end-position=466328}}
 
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{{#set: left-end-position=459419}}
 
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{{#set: centisome-position=80.90328    }}
 
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{{#set: organism associated=S.japonica_carotenoid_curated}}
 
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{{#set: nb reaction associated=2}}
 
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{{#set: nb pathway associated=1}}
 

Latest revision as of 11:14, 18 March 2021

Metabolite N-SUCCINYLLL-2-6-DIAMINOPIMELATE

  • common-name:
    • n-succinyl-l,l-2,6-diaminopimelate
  • smiles:
    • c(cc([n+])c(=o)[o-])cc(nc(ccc([o-])=o)=o)c([o-])=o
  • inchi-key:
    • glxuwzbupatpbr-bqbzgakwsa-l
  • molecular-weight:
    • 288.257

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

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