|
|
| (7 intermediate revisions by 3 users not shown) |
| Line 1: |
Line 1: |
| − | [[Category:reaction]] | + | [[Category:metabolite]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DNA-LIGASE-ATP-RXN DNA-LIGASE-ATP-RXN] == | + | == Metabolite N-methyl-terminal-XPK == |
| − | * direction:
| |
| − | ** left-to-right
| |
| | * common-name: | | * common-name: |
| − | ** dna ligase (atp) | + | ** an n terminal n-methyl-(a/s)pk-[protein] |
| − | * ec-number:
| + | == Reaction(s) known to consume the compound == |
| − | ** [http://enzyme.expasy.org/EC/6.5.1.7 ec-6.5.1.7]
| + | * [[RXN-12890]] |
| − | ** [http://enzyme.expasy.org/EC/6.5.1.1 ec-6.5.1.1]
| + | == Reaction(s) known to produce the compound == |
| − | ** [http://enzyme.expasy.org/EC/6.5.1.6 ec-6.5.1.6]
| + | * [[RXN-12889]] |
| − | == Reaction formula == | + | == Reaction(s) of unknown directionality == |
| − | * 1 [[3-Hydroxy-Terminated-DNAs]][c] '''+''' 1 [[5-Phospho-terminated-DNAs]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[DNA-N]][c] '''+''' 1 [[PPI]][c] | + | {{#set: common-name=an n terminal n-methyl-(a/s)pk-[protein]}} |
| − | == Gene(s) associated with this reaction == | |
| − | * Gene: [[SJ13521]] | |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[SJ15543]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | ** Category: [[orthology]]
| |
| − | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
| |
| − | * Gene: [[SJ16080]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | ** Category: [[orthology]]
| |
| − | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
| |
| − | == Pathway(s) == | |
| − | == Reconstruction information ==
| |
| − | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
| |
| − | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
| |
| − | == External links ==
| |
| − | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
| |
| − | * LIGAND-RXN:
| |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R00381 R00381]
| |
| − | * UNIPROT:
| |
| − | ** [http://www.uniprot.org/uniprot/P12000 P12000]
| |
| − | ** [http://www.uniprot.org/uniprot/P18858 P18858]
| |
| − | ** [http://www.uniprot.org/uniprot/P35970 P35970]
| |
| − | ** [http://www.uniprot.org/uniprot/Q9QNG8 Q9QNG8]
| |
| − | ** [http://www.uniprot.org/uniprot/Q9PM08 Q9PM08]
| |
| − | ** [http://www.uniprot.org/uniprot/Q57635 Q57635]
| |
| − | ** [http://www.uniprot.org/uniprot/P49917 P49917]
| |
| − | ** [http://www.uniprot.org/uniprot/P49916 P49916]
| |
| − | ** [http://www.uniprot.org/uniprot/P37913 P37913]
| |
| − | ** [http://www.uniprot.org/uniprot/P51892 P51892]
| |
| − | ** [http://www.uniprot.org/uniprot/P16272 P16272]
| |
| − | ** [http://www.uniprot.org/uniprot/P33798 P33798]
| |
| − | ** [http://www.uniprot.org/uniprot/P00970 P00970]
| |
| − | ** [http://www.uniprot.org/uniprot/P00969 P00969]
| |
| − | ** [http://www.uniprot.org/uniprot/P04819 P04819]
| |
| − | ** [http://www.uniprot.org/uniprot/P19088 P19088]
| |
| − | ** [http://www.uniprot.org/uniprot/P07717 P07717]
| |
| − | ** [http://www.uniprot.org/uniprot/P26813 P26813]
| |
| − | ** [http://www.uniprot.org/uniprot/Q02093 Q02093]
| |
| − | ** [http://www.uniprot.org/uniprot/Q23694 Q23694]
| |
| − | ** [http://www.uniprot.org/uniprot/Q67480 Q67480]
| |
| − | ** [http://www.uniprot.org/uniprot/Q42572 Q42572]
| |
| − | ** [http://www.uniprot.org/uniprot/P20492 P20492]
| |
| − | </div>
| |
| − | {{#set: direction=left-to-right}}
| |
| − | {{#set: common-name=dna ligase (atp)}} | |
| − | {{#set: ec-number=ec-6.5.1.1|ec-6.5.1.7|ec-6.5.1.6}}
| |
| − | {{#set: nb gene associated=3}}
| |
| − | {{#set: nb pathway associated=0}}
| |
| − | {{#set: reconstruction category=annotation|orthology}}
| |
| − | {{#set: reconstruction tool=pantograph|pathwaytools}}
| |
| − | {{#set: reconstruction comment=n.a}}
| |
| − | {{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
| |
