Difference between revisions of "N4-N-ACETYL-BETA-D-GLUCOSAMINYL-F6"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-320 RXN66-320] == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9104 RXN-9104] == * direction: ** left-to-right * common-name: ** 1,4-beta-d-xylan synthase * e...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-320 RXN66-320] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9104 RXN-9104] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** 1,4-beta-d-xylan synthase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/5.3.3.5 ec-5.3.3.5]
+
** [http://enzyme.expasy.org/EC/2.4.2.24 ec-2.4.2.24]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ZYMOSTEROL]][c] '''=>''' 1 [[5-ALPHA-CHOLESTA-724-DIEN-3-BETA-OL]][c]
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* 1 [[1-4-beta-Xylan]][c] '''+''' 1 [[UDP-D-XYLOSE]][c] '''=>''' 1 [[1-4-beta-Xylan]][c] '''+''' 1 [[UDP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[SJ22094]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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* [[PWY66-4]], cholesterol biosynthesis III (via desmosterol): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-4 PWY66-4]
+
* [[PWY-5800]], xylan biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5800 PWY-5800]
−
** '''14''' reactions found over '''4''' reactions in the full pathway
+
** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[PWY66-341]], cholesterol biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-341 PWY66-341]
 
−
** '''14''' reactions found over '''18''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=34000 34000]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15290 15290]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R04804 R04804]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03928 R03928]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: ec-number=ec-5.3.3.5}}
+
{{#set: common-name=1,4-beta-d-xylan synthase}}
−
{{#set: nb gene associated=0}}
+
{{#set: ec-number=ec-2.4.2.24}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb gene associated=1}}
−
{{#set: reconstruction category=gap-filling}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction tool=meneco}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction comment=added for gapfilling}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}
+
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 09:29, 27 August 2019

Reaction RXN-9104

  • direction:
    • left-to-right
  • common-name:
    • 1,4-beta-d-xylan synthase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5800, xylan biosynthesis: PWY-5800
    • 1 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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