Difference between revisions of "N4-N-ACETYL-BETA-D-GLUCOSAMINYL-F6"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8629 RXN-8629] == * direction: ** reversible * common-name: ** h-gcv-protein-(dihydrolipoyl)lys...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-320 RXN66-320] == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8629 RXN-8629] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-320 RXN66-320] ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
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* common-name:
 
−
** h-gcv-protein-(dihydrolipoyl)lysine:nad+ oxidoreductase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.8.1.4 ec-1.8.1.4]
+
** [http://enzyme.expasy.org/EC/5.3.3.5 ec-5.3.3.5]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[DIHYDROLIPOYL-GCVH]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[NADH]][c] '''+''' 1 [[PROTEIN-LIPOYLLYSINE]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[ZYMOSTEROL]][c] '''=>''' 1 [[5-ALPHA-CHOLESTA-724-DIEN-3-BETA-OL]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ10661]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ03718]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ13629]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ06474]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[GLYCLEAV-PWY]], glycine cleavage: [http://metacyc.org/META/NEW-IMAGE?object=GLYCLEAV-PWY GLYCLEAV-PWY]
+
* [[PWY66-4]], cholesterol biosynthesis III (via desmosterol): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-4 PWY66-4]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''14''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY66-341]], cholesterol biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-341 PWY66-341]
 +
** '''14''' reactions found over '''18''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
{{#set: direction=reversible}}
+
* RHEA:
−
{{#set: common-name=h-gcv-protein-(dihydrolipoyl)lysine:nad+ oxidoreductase}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=34000 34000]
−
{{#set: ec-number=ec-1.8.1.4}}
+
* LIGAND-RXN:
−
{{#set: nb gene associated=4}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R04804 R04804]
−
{{#set: nb pathway associated=1}}
+
{{#set: direction=left-to-right}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: ec-number=ec-5.3.3.5}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: nb gene associated=0}}
−
{{#set: reconstruction comment=n.a}}
+
{{#set: nb pathway associated=2}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction category=gap-filling}}
 +
{{#set: reconstruction tool=meneco}}
 +
{{#set: reconstruction comment=added for gapfilling}}
 +
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}

Revision as of 14:25, 26 August 2019

Reaction RXN66-320

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY66-4, cholesterol biosynthesis III (via desmosterol): PWY66-4
    • 14 reactions found over 4 reactions in the full pathway
  • PWY66-341, cholesterol biosynthesis I: PWY66-341
    • 14 reactions found over 18 reactions in the full pathway

Reconstruction information

External links





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