Difference between revisions of "NAG1P-URIDYLTRANS-RXN"

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(Created page with "Category:reaction == Reaction CREATININASE-RXN == * direction: ** reversible * common-name: ** creatininase * ec-number: ** [http://enzyme.expasy.org/EC/3.5.2.10 ec-3.5.2....")
(Created page with "Category:reaction == Reaction RXN-12399 == * direction: ** left-to-right * common-name: ** xyloglucan xlxg oligosaccharide β-galactosidase ** xlxg xyloglucan oligosac...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction CREATININASE-RXN ==
+
== Reaction RXN-12399 ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** creatininase
+
** xyloglucan xlxg oligosaccharide β-galactosidase
 +
** xlxg xyloglucan oligosaccharide β-galactosidase
 +
** beta-galactosidase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.5.2.10 ec-3.5.2.10]
+
** [http://enzyme.expasy.org/EC/3.2.1.23 ec-3.2.1.23]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CREATININE]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[CREATINE]][c]
+
* 1 [[CPD-13377]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-13375]][c] '''+''' 1 [[D-galactopyranose]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ13924]]
+
* Gene: [[SJ03139]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ10277]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ04558]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ14193]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[CRNFORCAT-PWY]], creatinine degradation I:
+
* [[PWY-6807]], xyloglucan degradation II (exoglucanase):
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
** '''3''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=left-to-right}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14536 14536]
+
{{#set: common-name=beta-galactosidase|xlxg xyloglucan oligosaccharide &beta;-galactosidase|xyloglucan xlxg oligosaccharide &beta;-galactosidase}}
−
* LIGAND-RXN:
+
{{#set: ec-number=ec-3.2.1.23}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R01884 R01884]
+
{{#set: nb gene associated=4}}
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P74740 P74740]
 
−
** [http://www.uniprot.org/uniprot/Q52548 Q52548]
 
−
{{#set: direction=reversible}}
 
−
{{#set: common-name=creatininase}}
 
−
{{#set: ec-number=ec-3.5.2.10}}
 
−
{{#set: nb gene associated=1}}
 
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 11:22, 15 January 2021

Reaction RXN-12399

  • direction:
    • left-to-right
  • common-name:
    • xyloglucan xlxg oligosaccharide β-galactosidase
    • xlxg xyloglucan oligosaccharide β-galactosidase
    • beta-galactosidase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6807, xyloglucan degradation II (exoglucanase):
    • 3 reactions found over 8 reactions in the full pathway

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=NAG1P-URIDYLTRANS-RXN&oldid=115030"