Difference between revisions of "NAG1P-URIDYLTRANS-RXN"

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(Created page with "Category:reaction == Reaction 2.8.2.29-RXN == * direction: ** left-to-right * common-name: ** [heparan sulfate]-glucosamine 3-o-sulfotransferase * ec-number: ** [http://en...")
(Created page with "Category:reaction == Reaction NAG1P-URIDYLTRANS-RXN == * direction: ** left-to-right * common-name: ** n-acetylglucosamine-1-phosphate uridyltransferase * ec-number: ** [h...")
 
(4 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 2.8.2.29-RXN ==
+
== Reaction NAG1P-URIDYLTRANS-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** [heparan sulfate]-glucosamine 3-o-sulfotransferase
+
** n-acetylglucosamine-1-phosphate uridyltransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.8.2.29 ec-2.8.2.29]
+
** [http://enzyme.expasy.org/EC/2.7.7.23 ec-2.7.7.23]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[Heparan-sulfate-D-GlcNS]][c] '''+''' 1 [[PAPS]][c] '''=>''' 1 [[3-5-ADP]][c] '''+''' 1 [[Heparan-sulfate-3-N-disulfate]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[N-ACETYL-D-GLUCOSAMINE-1-P]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[UTP]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[UDP-N-ACETYL-D-GLUCOSAMINE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ20108]]
+
* Gene: [[SJ16454]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ03148]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6558]], heparan sulfate biosynthesis (late stages):
+
* [[PWY0-1261]], anhydromuropeptides recycling I:
−
** '''7''' reactions found over '''13''' reactions in the full pathway
+
** '''3''' reactions found over '''12''' reactions in the full pathway
 +
* [[UDPNACETYLGALSYN-PWY]], UDP-N-acetyl-D-glucosamine biosynthesis II:
 +
** '''3''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-5514]], UDP-N-acetyl-D-galactosamine biosynthesis II:
 +
** '''5''' reactions found over '''7''' reactions in the full pathway
 +
* [[UDPNAGSYN-PWY]], UDP-N-acetyl-D-glucosamine biosynthesis I:
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR106519
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15462 15462]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13510 13510]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00416 R00416]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q9PPA2 Q9PPA2]
 +
** [http://www.uniprot.org/uniprot/Q9JWN3 Q9JWN3]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=[heparan sulfate]-glucosamine 3-o-sulfotransferase}}
+
{{#set: common-name=n-acetylglucosamine-1-phosphate uridyltransferase}}
−
{{#set: ec-number=ec-2.8.2.29}}
+
{{#set: ec-number=ec-2.7.7.23}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=4}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome}}

Latest revision as of 11:20, 18 March 2021

Reaction NAG1P-URIDYLTRANS-RXN

  • direction:
    • left-to-right
  • common-name:
    • n-acetylglucosamine-1-phosphate uridyltransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY0-1261, anhydromuropeptides recycling I:
    • 3 reactions found over 12 reactions in the full pathway
  • UDPNACETYLGALSYN-PWY, UDP-N-acetyl-D-glucosamine biosynthesis II:
    • 3 reactions found over 6 reactions in the full pathway
  • PWY-5514, UDP-N-acetyl-D-galactosamine biosynthesis II:
    • 5 reactions found over 7 reactions in the full pathway
  • UDPNAGSYN-PWY, UDP-N-acetyl-D-glucosamine biosynthesis I:
    • 4 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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