Difference between revisions of "NODOx"

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(Created page with "Category:reaction == Reaction HOMOSERINE-O-ACETYLTRANSFERASE-RXN == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/2.3.1.31 ec-2.3.1.31] == Reacti...")
(Created page with "Category:reaction == Reaction RXN-13185 == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/1.23.5.1 ec-1.23.5.1] == Reaction formula == * 2 ASCOR...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction HOMOSERINE-O-ACETYLTRANSFERASE-RXN ==
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== Reaction RXN-13185 ==
 
* direction:
 
* direction:
 
** reversible
 
** reversible
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/2.3.1.31 ec-2.3.1.31]
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** [http://enzyme.expasy.org/EC/1.23.5.1 ec-1.23.5.1]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[ACETYL-COA]][c] '''+''' 1 [[HOMO-SER]][c] '''<=>''' 1 [[CO-A]][c] '''+''' 1 [[CPD-667]][c]
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* 2 [[ASCORBATE]][c] '''+''' 1 [[CPD1F-133]][c] '''+''' 2 [[PROTON]][c] '''<=>''' 1 [[CPD1F-130]][c] '''+''' 2 [[L-DEHYDRO-ASCORBATE]][c] '''+''' 2 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[SJ03764]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[SJ19927]]
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** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[SJ20456]]
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** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-5344]], L-homocysteine biosynthesis:
 
** '''2''' reactions found over '''2''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R10055 R10055]
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13704 13704]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=32374 32374]
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R01776 R01776]
 
* UNIPROT:
 
** [http://www.uniprot.org/uniprot/P08465 P08465]
 
** [http://www.uniprot.org/uniprot/O60062 O60062]
 
** [http://www.uniprot.org/uniprot/P94891 P94891]
 
** [http://www.uniprot.org/uniprot/P12917 P12917]
 
 
{{#set: direction=reversible}}
 
{{#set: direction=reversible}}
{{#set: ec-number=ec-2.3.1.31}}
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{{#set: ec-number=ec-1.23.5.1}}
{{#set: nb gene associated=0}}
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{{#set: nb gene associated=3}}
{{#set: nb pathway associated=1}}
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{{#set: nb pathway associated=0}}
{{#set: reconstruction category=gap-filling}}
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{{#set: reconstruction category=annotation}}
{{#set: reconstruction tool=meneco}}
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{{#set: reconstruction tool=pathwaytools}}
{{#set: reconstruction comment=added for gapfilling}}
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{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}
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{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 11:24, 15 January 2021

Reaction RXN-13185

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links