Difference between revisions of "NODOx"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7000 PWY-7000] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-201174 tax-...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.21.89-RXN 3.4.21.89-RXN] == * direction: ** left-to-right * common-name: ** leader peptidase *...")
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7000 PWY-7000] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.21.89-RXN 3.4.21.89-RXN] ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-201174 tax-201174]
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** left-to-right
 
* common-name:
 
* common-name:
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** kanamycin biosynthesis
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** leader peptidase
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== Reaction(s) found ==
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* ec-number:
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* [[RXN-13118]]
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** [http://enzyme.expasy.org/EC/3.4.21.89 ec-3.4.21.89]
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== Reaction(s) not found ==
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== Reaction formula ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13124 RXN-13124]
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* 1 [[Peptides-with-Leader-Sequence]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Leader-Sequences]][c] '''+''' 1 [[Peptides-holder]][c]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14402 RXN-14402]
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== Gene(s) associated with this reaction  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13119 RXN-13119]
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* Gene: [[SJ15986]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13127 RXN-13127]
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** Category: [[annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13165 RXN-13165]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13116 RXN-13116]
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* Gene: [[SJ21699]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13146 RXN-13146]
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** Category: [[annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13121 RXN-13121]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13122 RXN-13122]
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* Gene: [[SJ19533]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13145 RXN-13145]
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** Category: [[annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13117 RXN-13117]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13147 RXN-13147]
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* Gene: [[SJ01779]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13148 RXN-13148]
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** Category: [[orthology]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13149 RXN-13149]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13125 RXN-13125]
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== Pathway(s) ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14401 RXN-14401]
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== Reconstruction information  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13123 RXN-13123]
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13166 RXN-13166]
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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{{#set: taxonomic-range=tax-201174}}
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== External links  ==
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{{#set: common-name=kanamycin biosynthesis}}
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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{{#set: nb reaction found=1}}
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* UNIPROT:
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{{#set: completion rate=0.05}}
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** [http://www.uniprot.org/uniprot/Q9RUF9 Q9RUF9]
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{{#set: nb total reaction=19}}
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** [http://www.uniprot.org/uniprot/Q9ZE32 Q9ZE32]
 +
** [http://www.uniprot.org/uniprot/Q9CDG2 Q9CDG2]
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** [http://www.uniprot.org/uniprot/Q9KPB1 Q9KPB1]
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** [http://www.uniprot.org/uniprot/Q9PBA0 Q9PBA0]
 +
** [http://www.uniprot.org/uniprot/Q57708 Q57708]
 +
** [http://www.uniprot.org/uniprot/O67088 O67088]
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** [http://www.uniprot.org/uniprot/Q9JV66 Q9JV66]
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** [http://www.uniprot.org/uniprot/Q9PP67 Q9PP67]
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** [http://www.uniprot.org/uniprot/Q9I5G7 Q9I5G7]
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** [http://www.uniprot.org/uniprot/Q8FF16 Q8FF16]
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** [http://www.uniprot.org/uniprot/Q8XA33 Q8XA33]
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** [http://www.uniprot.org/uniprot/P41026 P41026]
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** [http://www.uniprot.org/uniprot/P41027 P41027]
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** [http://www.uniprot.org/uniprot/P37943 P37943]
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** [http://www.uniprot.org/uniprot/Q57350 Q57350]
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** [http://www.uniprot.org/uniprot/Q7M0V9 Q7M0V9]
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** [http://www.uniprot.org/uniprot/P0A1W2 P0A1W2]
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** [http://www.uniprot.org/uniprot/P26844 P26844]
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** [http://www.uniprot.org/uniprot/P28628 P28628]
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** [http://www.uniprot.org/uniprot/P41025 P41025]
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** [http://www.uniprot.org/uniprot/Q51876 Q51876]
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** [http://www.uniprot.org/uniprot/Q52697 Q52697]
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** [http://www.uniprot.org/uniprot/Q45225 Q45225]
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** [http://www.uniprot.org/uniprot/P72660 P72660]
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** [http://www.uniprot.org/uniprot/P73157 P73157]
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** [http://www.uniprot.org/uniprot/O69884 O69884]
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** [http://www.uniprot.org/uniprot/P00803 P00803]
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</div>
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{{#set: direction=left-to-right}}
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{{#set: common-name=leader peptidase}}
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{{#set: ec-number=ec-3.4.21.89}}
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{{#set: nb gene associated=4}}
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{{#set: nb pathway associated=0}}
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{{#set: reconstruction category=annotation|orthology}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Revision as of 09:32, 27 August 2019

Reaction 3.4.21.89-RXN

  • direction:
    • left-to-right
  • common-name:
    • leader peptidase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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