Difference between revisions of "NODOy"

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(Created page with "Category:reaction == Reaction RXN-12378 == * direction: ** left-to-right * common-name: ** trna (guanine26-n2-methyltransferase * ec-number: ** [http://enzyme.expasy.org/E...")
(Created page with "Category:reaction == Reaction MANNKIN-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.7.1.7 ec-2.7.1.7] == Reaction formula == * 1 AT...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-12378 ==
+
== Reaction MANNKIN-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
* common-name:
 
** trna (guanine26-n2-methyltransferase
 
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/2.1.1.215 ec-2.1.1.215]
+
** [http://enzyme.expasy.org/EC/2.7.1.7 ec-2.7.1.7]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[Guanine26-Guanine27-in-tRNAs]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[tRNA-Containing-N2-Methylgua-26-Gua27]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[D-mannopyranose]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[CPD-15979]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ14807]]
+
* Gene: [[SJ04919]]
** Category: [[annotation]]
+
** Category: [[orthology]]
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
* Gene: [[SJ09381]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-3861]], mannitol degradation II:
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6140]], CMP-2-keto-3-deoxy-D-glycero-D-galacto-nononate biosynthesis:
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6992]], 1,5-anhydrofructose degradation:
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11029 11029]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R01326 R01326]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=trna (guanine26-n2-methyltransferase}}
+
{{#set: ec-number=ec-2.7.1.7}}
{{#set: ec-number=ec-2.1.1.215}}
+
{{#set: nb gene associated=1}}
{{#set: nb gene associated=2}}
+
{{#set: nb pathway associated=3}}
{{#set: nb pathway associated=0}}
+
{{#set: reconstruction category=orthology}}
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction tool=pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}

Revision as of 19:05, 14 January 2021

Reaction MANNKIN-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-3861, mannitol degradation II:
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-6140, CMP-2-keto-3-deoxy-D-glycero-D-galacto-nononate biosynthesis:
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-6992, 1,5-anhydrofructose degradation:
    • 4 reactions found over 5 reactions in the full pathway

Reconstruction information

External links