Difference between revisions of "NODOy"

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(Created page with "Category:reaction == Reaction STRICTOSIDINE-SYNTHASE-RXN == * direction: ** left-to-right * common-name: ** strictosidine synthase * ec-number: ** [http://enzyme.expasy.or...")
(Created page with "Category:reaction == Reaction PGIAh == * direction: ** reversible * common-name: ** glucose-6-phosphate isomerase, chloroplast (g6p-a) == Reaction formula == * 1.0 ALPHA...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction STRICTOSIDINE-SYNTHASE-RXN ==
+
== Reaction PGIAh ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** strictosidine synthase
+
** glucose-6-phosphate isomerase, chloroplast (g6p-a)
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/4.3.3.2 ec-4.3.3.2]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[SECOLOGANIN-CPD]][c] '''+''' 1 [[TRYPTAMINE]][c] '''=>''' 1 [[STRICTOSIDINE]][c] '''+''' 1 [[WATER]][c]
+
* 1.0 [[ALPHA-GLC-6-P]][h] '''<=>''' 1.0 [[FRUCTOSE-6P]][h]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ12255]]
+
* Gene: [[SJ00085]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ08179]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5290]], secologanin and strictosidine biosynthesis:
 
−
** '''2''' reactions found over '''17''' reactions in the full pathway
 
−
* [[PWY-6326]], camptothecin biosynthesis:
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=reversible}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15013 15013]
+
{{#set: common-name=glucose-6-phosphate isomerase, chloroplast (g6p-a)}}
−
* LIGAND-RXN:
+
{{#set: nb gene associated=2}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R03738 R03738]
+
{{#set: nb pathway associated=0}}
−
* UNIPROT:
+
{{#set: reconstruction category=orthology}}
−
** [http://www.uniprot.org/uniprot/Q9VAQ9 Q9VAQ9]
+
{{#set: reconstruction tool=pantograph}}
−
** [http://www.uniprot.org/uniprot/P68175 P68175]
 
−
** [http://www.uniprot.org/uniprot/P18417 P18417]
 
−
** [http://www.uniprot.org/uniprot/P68174 P68174]
 
−
{{#set: direction=left-to-right}}
 
−
{{#set: common-name=strictosidine synthase}}
 
−
{{#set: ec-number=ec-4.3.3.2}}
 
−
{{#set: nb gene associated=1}}
 
−
{{#set: nb pathway associated=2}}
 
−
{{#set: reconstruction category=annotation|orthology}}
 
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}

Revision as of 08:38, 15 March 2021

Reaction PGIAh

  • direction:
    • reversible
  • common-name:
    • glucose-6-phosphate isomerase, chloroplast (g6p-a)

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=NODOy&oldid=129394"