Difference between revisions of "NTDP"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.1.1.140-RXN 2.1.1.140-RXN] == * direction: ** left-to-right * common-name: ** s-adenosyl-l-methio...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HISTIDINE-AMMONIA-LYASE-RXN HISTIDINE-AMMONIA-LYASE-RXN] == * direction: ** left-to-right * ec-numb...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.1.1.140-RXN 2.1.1.140-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HISTIDINE-AMMONIA-LYASE-RXN HISTIDINE-AMMONIA-LYASE-RXN] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** s-adenosyl-l-methionine: coclaurine n-methyltransferase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.1.1.140 ec-2.1.1.140]
+
** [http://enzyme.expasy.org/EC/4.3.1.3 ec-4.3.1.3]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[S-COCLAURINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[S-N-METHYLCOCLAURINE]][c]
+
* 1 [[HIS]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[UROCANATE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ20642]]
+
* Gene: [[SJ07221]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-3581]], (S)-reticuline biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3581 PWY-3581]
+
* [[HISDEG-PWY]], L-histidine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=HISDEG-PWY HISDEG-PWY]
−
** '''6''' reactions found over '''11''' reactions in the full pathway
+
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-5028]], L-histidine degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5028 PWY-5028]
 +
** '''1''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-5030]], L-histidine degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5030 PWY-5030]
 +
** '''3''' reactions found over '''6''' reactions in the full pathway
 +
* [[HISHP-PWY]], L-histidine degradation VI: [http://metacyc.org/META/NEW-IMAGE?object=HISHP-PWY HISHP-PWY]
 +
** '''1''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17410 17410]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21233 21233]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R04692 R04692]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01168 R01168]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P21310 P21310]
 +
** [http://www.uniprot.org/uniprot/P21213 P21213]
 +
** [http://www.uniprot.org/uniprot/P35492 P35492]
 +
** [http://www.uniprot.org/uniprot/Q9RZ06 Q9RZ06]
 +
** [http://www.uniprot.org/uniprot/P24221 P24221]
 +
** [http://www.uniprot.org/uniprot/P42357 P42357]
 +
** [http://www.uniprot.org/uniprot/Q20502 Q20502]
 +
** [http://www.uniprot.org/uniprot/P10944 P10944]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=s-adenosyl-l-methionine: coclaurine n-methyltransferase}}
+
{{#set: ec-number=ec-4.3.1.3}}
−
{{#set: ec-number=ec-2.1.1.140}}
 
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=4}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}

Revision as of 14:28, 26 August 2019

Reaction HISTIDINE-AMMONIA-LYASE-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • HISDEG-PWY, L-histidine degradation I: HISDEG-PWY
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-5028, L-histidine degradation II: PWY-5028
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-5030, L-histidine degradation III: PWY-5030
    • 3 reactions found over 6 reactions in the full pathway
  • HISHP-PWY, L-histidine degradation VI: HISHP-PWY
    • 1 reactions found over 8 reactions in the full pathway

Reconstruction information

External links





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