Difference between revisions of "NUCLEOSIDE-DIP-KIN-RXN"
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(Created page with "Category:reaction == Reaction RXN0-5055 == * direction: ** left-to-right * common-name: ** acetyl-coa carboxyltransferase * ec-number: ** [http://enzyme.expasy.org/EC/2.1....") |
(Created page with "Category:reaction == Reaction NUCLEOSIDE-DIP-KIN-RXN == * direction: ** left-to-right * common-name: ** nucleoside diphosphate kinase * ec-number: ** [http://enzyme.expasy...") |
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[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction | + | == Reaction NUCLEOSIDE-DIP-KIN-RXN == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
* common-name: | * common-name: | ||
− | ** | + | ** nucleoside diphosphate kinase |
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/2. | + | ** [http://enzyme.expasy.org/EC/2.7.4.6 ec-2.7.4.6] |
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[ATP]][c] '''+''' 1 [[Nucleoside-Diphosphates]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[Nucleoside-Triphosphates]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
− | * Gene: [[ | + | * Gene: [[SJ07124]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
− | * Gene: [[ | + | * Gene: [[SJ21705]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
− | * Gene: [[ | + | ** Category: [[orthology]] |
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ20794]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | * Gene: [[SJ21816]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
− | * Gene: [[ | + | * Gene: [[SJ08159]] |
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ21967]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | * Gene: [[SJ16893]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
− | * Gene: [[ | + | * Gene: [[SJ20076]] |
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | * Gene: [[SJ10125]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
</div> | </div> | ||
== Pathway(s) == | == Pathway(s) == | ||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
== Reconstruction information == | == Reconstruction information == | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
+ | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
+ | * METANETX-RXN : MNXR106478 | ||
+ | * RHEA: | ||
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18114 18114] | ||
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R00331 R00331] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/P15531 P15531] | ||
+ | ** [http://www.uniprot.org/uniprot/P15266 P15266] | ||
+ | ** [http://www.uniprot.org/uniprot/P19804 P19804] | ||
+ | ** [http://www.uniprot.org/uniprot/Q05982 Q05982] | ||
+ | ** [http://www.uniprot.org/uniprot/P15532 P15532] | ||
+ | ** [http://www.uniprot.org/uniprot/P22887 P22887] | ||
+ | ** [http://www.uniprot.org/uniprot/P22392 P22392] | ||
+ | ** [http://www.uniprot.org/uniprot/P65533 P65533] | ||
+ | ** [http://www.uniprot.org/uniprot/O84508 O84508] | ||
+ | ** [http://www.uniprot.org/uniprot/P84284 P84284] | ||
+ | ** [http://www.uniprot.org/uniprot/P43802 P43802] | ||
+ | ** [http://www.uniprot.org/uniprot/O26358 O26358] | ||
+ | ** [http://www.uniprot.org/uniprot/P56075 P56075] | ||
+ | ** [http://www.uniprot.org/uniprot/O67528 O67528] | ||
+ | ** [http://www.uniprot.org/uniprot/O83974 O83974] | ||
+ | ** [http://www.uniprot.org/uniprot/O29491 O29491] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9ZE91 Q9ZE91] | ||
+ | ** [http://www.uniprot.org/uniprot/Q58661 Q58661] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9PIG7 Q9PIG7] | ||
+ | ** [http://www.uniprot.org/uniprot/Q13232 Q13232] | ||
+ | ** [http://www.uniprot.org/uniprot/P48817 P48817] | ||
+ | ** [http://www.uniprot.org/uniprot/P0A763 P0A763] | ||
+ | ** [http://www.uniprot.org/uniprot/P08879 P08879] | ||
+ | ** [http://www.uniprot.org/uniprot/Q02254 Q02254] | ||
+ | ** [http://www.uniprot.org/uniprot/Q01402 Q01402] | ||
+ | ** [http://www.uniprot.org/uniprot/Q01768 Q01768] | ||
+ | ** [http://www.uniprot.org/uniprot/P47922 P47922] | ||
+ | ** [http://www.uniprot.org/uniprot/P36010 P36010] | ||
+ | ** [http://www.uniprot.org/uniprot/Q07661 Q07661] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9S8M2 Q9S8M2] | ||
+ | ** [http://www.uniprot.org/uniprot/P47921 P47921] | ||
+ | ** [http://www.uniprot.org/uniprot/P47923 P47923] | ||
+ | ** [http://www.uniprot.org/uniprot/P81766 P81766] | ||
+ | ** [http://www.uniprot.org/uniprot/P50589 P50589] | ||
+ | ** [http://www.uniprot.org/uniprot/P74494 P74494] | ||
+ | ** [http://www.uniprot.org/uniprot/Q59636 Q59636] | ||
+ | ** [http://www.uniprot.org/uniprot/O49203 O49203] | ||
+ | ** [http://www.uniprot.org/uniprot/Q39839 Q39839] | ||
+ | ** [http://www.uniprot.org/uniprot/Q96559 Q96559] | ||
+ | ** [http://www.uniprot.org/uniprot/P39207 P39207] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9ZGE0 Q9ZGE0] | ||
+ | ** [http://www.uniprot.org/uniprot/P49740 P49740] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9UUY8 Q9UUY8] | ||
+ | ** [http://www.uniprot.org/uniprot/O64903 O64903] | ||
+ | </div> | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
− | {{#set: common-name= | + | {{#set: common-name=nucleoside diphosphate kinase}} |
− | {{#set: ec-number=ec-2. | + | {{#set: ec-number=ec-2.7.4.6}} |
− | {{#set: nb gene associated= | + | {{#set: nb gene associated=9}} |
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=0}} |
− | {{#set: reconstruction category=annotation | + | {{#set: reconstruction category=orthology|annotation}} |
− | {{#set: reconstruction tool=pathwaytools | + | {{#set: reconstruction tool=pantograph|pathwaytools}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source=saccharina_japonica_genome | + | {{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}} |
Latest revision as of 11:21, 18 March 2021
Contents
Reaction NUCLEOSIDE-DIP-KIN-RXN
- direction:
- left-to-right
- common-name:
- nucleoside diphosphate kinase
- ec-number:
Reaction formula
- 1 ATP[c] + 1 Nucleoside-Diphosphates[c] => 1 ADP[c] + 1 Nucleoside-Triphosphates[c]
Gene(s) associated with this reaction
- Gene: SJ07124
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ21705
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ20794
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ21816
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ08159
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ21967
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ16893
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ20076
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ10125
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
External links
- METANETX-RXN : MNXR106478
- RHEA:
- LIGAND-RXN:
- UNIPROT:
- P15531
- P15266
- P19804
- Q05982
- P15532
- P22887
- P22392
- P65533
- O84508
- P84284
- P43802
- O26358
- P56075
- O67528
- O83974
- O29491
- Q9ZE91
- Q58661
- Q9PIG7
- Q13232
- P48817
- P0A763
- P08879
- Q02254
- Q01402
- Q01768
- P47922
- P36010
- Q07661
- Q9S8M2
- P47921
- P47923
- P81766
- P50589
- P74494
- Q59636
- O49203
- Q39839
- Q96559
- P39207
- Q9ZGE0
- P49740
- Q9UUY8
- O64903